eF-site ID 4qtu-D
PDB Code 4qtu
Chain D

click to enlarge
Title Structure of S. cerevisiae Bud23-Trm112 complex involved in formation of m7G1575 on 18S rRNA (SAM bound form)
Classification TRANSFERASE
Compound Multifunctional methyltransferase subunit TRM112
Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (BUD23_YEAST)
Sequence D:  EAHKYTGSTRVQHIQAKMTLRALELLNLQPCSFILDIGCG
SGLSGEILTQEGDHVWCGLDISPSMLATGLSRELEGDLML
QDMGTGIPFRAGSFDAAISISAIQWLXNDPKQRLMRFFNT
LYAALKKGGKFVAQFYPKNDDQVDDILQSAKVAGFSGGLV
VDDPESKKNKKYYLVLSSG
Description


Functional site

1) chain D
residue 186
type
sequence D
description BINDING SITE FOR RESIDUE EDO B 304
source : BC2

2) chain D
residue 188
type
sequence E
description BINDING SITE FOR RESIDUE EDO B 304
source : BC2

3) chain D
residue 170
type
sequence L
description BINDING SITE FOR RESIDUE EDO B 305
source : BC3

4) chain D
residue 180
type
sequence G
description BINDING SITE FOR RESIDUE EDO B 305
source : BC3

5) chain D
residue 198
type
sequence V
description BINDING SITE FOR RESIDUE EDO B 311
source : BC9

6) chain D
residue 22
type
sequence Y
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

7) chain D
residue 32
type
sequence Q
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

8) chain D
residue 55
type
sequence G
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

9) chain D
residue 56
type
sequence C
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

10) chain D
residue 57
type
sequence G
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

11) chain D
residue 60
type
sequence L
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

12) chain D
residue 61
type
sequence S
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

13) chain D
residue 77
type
sequence D
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

14) chain D
residue 78
type
sequence I
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

15) chain D
residue 79
type
sequence S
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

16) chain D
residue 82
type
sequence M
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

17) chain D
residue 98
type
sequence Q
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

18) chain D
residue 99
type
sequence D
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

19) chain D
residue 100
type
sequence M
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

20) chain D
residue 117
type
sequence I
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

21) chain D
residue 118
type
sequence S
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

22) chain D
residue 122
type
sequence W
description BINDING SITE FOR RESIDUE SAM D 301
source : CC4

23) chain D
residue 38
type
sequence R
description BINDING SITE FOR RESIDUE EDO D 302
source : CC5


Display surface

Download
Links