eF-site ID 4qto-ABCD
PDB Code 4qto
Chain A, B, C, D

click to enlarge
Title 1.65 Angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betB) from Staphylococcus aureus with BME-modified Cys289 and PEG molecule in active site
Classification OXIDOREDUCTASE
Compound Betaine aldehyde dehydrogenase
Source (Q5HCU0_STAAC)
Sequence A:  AMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFT
VSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAI
ADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYF
AGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYP
LLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEV
GFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK
HIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALN
GGYFHAGQVXSAGSRILVQNSIKDKFEQALIDRVKKIKLG
NGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK
RPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE
GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKL
GTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVS
KHILTNTNPQLVNWFSK
B:  AMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFT
VSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAI
ADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYF
AGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYP
LLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEV
GFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK
HIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALN
GGYFHAGQVXSAGSRILVQNSIKDKFEQALIDRVKKIKLG
NGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK
RPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE
GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKL
GTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVS
KHILTNTNPQLVNWFSK
C:  MELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTV
SEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIA
DKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFA
GLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPL
LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVG
FPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKH
IMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNG
GYFHAGQVXSAGSRILVQNSIKDKFEQALIDRVKKIKLGN
GFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKR
PDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEG
FETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLG
TVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSK
HILTNTNPQLVNWFSK
D:  ELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVS
EGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIAD
KIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAG
LADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLL
QASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGF
PKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHI
MKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGG
YFHAGQVXSAGSRILVQNSIKDKFEQALIDRVKKIKLGNG
FDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRP
DRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGF
ETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGT
VWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKH
ILTNTNPQLVNWFSK
Description


Functional site

1) chain A
residue 460
type
sequence K
description BINDING SITE FOR RESIDUE NA A 501
source : AC1

2) chain A
residue 463
type
sequence G
description BINDING SITE FOR RESIDUE NA A 501
source : AC1

3) chain B
residue 249
type
sequence V
description BINDING SITE FOR RESIDUE NA A 501
source : AC1

4) chain A
residue 283
type
sequence F
description BINDING SITE FOR RESIDUE PGE A 502
source : AC2

5) chain A
residue 448
type
sequence H
description BINDING SITE FOR RESIDUE PGE A 502
source : AC2

6) chain A
residue 450
type
sequence Y
description BINDING SITE FOR RESIDUE PGE A 502
source : AC2

7) chain A
residue 342
type
sequence S
description BINDING SITE FOR RESIDUE PGE A 503
source : AC3

8) chain A
residue 343
type
sequence Y
description BINDING SITE FOR RESIDUE PGE A 503
source : AC3

9) chain A
residue 346
type
sequence V
description BINDING SITE FOR RESIDUE PGE A 503
source : AC3

10) chain A
residue 385
type
sequence R
description BINDING SITE FOR RESIDUE PGE A 503
source : AC3

11) chain A
residue 8
type
sequence S
description BINDING SITE FOR RESIDUE PEG A 504
source : AC4

12) chain A
residue 17
type
sequence W
description BINDING SITE FOR RESIDUE PEG A 504
source : AC4

13) chain A
residue 197
type
sequence E
description BINDING SITE FOR RESIDUE PEG A 504
source : AC4

14) chain B
residue 267
type
sequence D
description BINDING SITE FOR RESIDUE PEG A 504
source : AC4

15) chain B
residue 268
type
sequence A
description BINDING SITE FOR RESIDUE PEG A 504
source : AC4

16) chain A
residue 155
type
sequence P
description BINDING SITE FOR RESIDUE PEG A 505
source : AC5

17) chain A
residue 234
type
sequence G
description BINDING SITE FOR RESIDUE PEG A 505
source : AC5

18) chain A
residue 289
type
sequence X
description BINDING SITE FOR RESIDUE PEG A 505
source : AC5

19) chain A
residue 336
type
sequence H
description BINDING SITE FOR RESIDUE PEG A 505
source : AC5

20) chain A
residue 392
type
sequence F
description BINDING SITE FOR RESIDUE PEG A 505
source : AC5

21) chain A
residue 61
type
sequence S
description BINDING SITE FOR RESIDUE PEG A 506
source : AC6

22) chain A
residue 62
type
sequence G
description BINDING SITE FOR RESIDUE PEG A 506
source : AC6

23) chain A
residue 63
type
sequence E
description BINDING SITE FOR RESIDUE PEG A 506
source : AC6

24) chain A
residue 103
type
sequence E
description BINDING SITE FOR RESIDUE TRS A 507
source : AC7

25) chain A
residue 324
type
sequence A
description BINDING SITE FOR RESIDUE TRS A 507
source : AC7

26) chain A
residue 326
type
sequence T
description BINDING SITE FOR RESIDUE TRS A 507
source : AC7

27) chain A
residue 327
type
sequence E
description BINDING SITE FOR RESIDUE TRS A 507
source : AC7

28) chain B
residue 493
type
sequence W
description BINDING SITE FOR RESIDUE TRS A 507
source : AC7

29) chain A
residue 249
type
sequence V
description BINDING SITE FOR RESIDUE NA B 501
source : AC8

30) chain B
residue 460
type
sequence K
description BINDING SITE FOR RESIDUE NA B 501
source : AC8

31) chain B
residue 463
type
sequence G
description BINDING SITE FOR RESIDUE NA B 501
source : AC8

32) chain B
residue 107
type
sequence A
description BINDING SITE FOR RESIDUE PGE B 502
source : AC9

33) chain B
residue 158
type
sequence Y
description BINDING SITE FOR RESIDUE PGE B 502
source : AC9

34) chain B
residue 448
type
sequence H
description BINDING SITE FOR RESIDUE PGE B 502
source : AC9

35) chain B
residue 450
type
sequence Y
description BINDING SITE FOR RESIDUE PGE B 502
source : AC9

36) chain B
residue 66
type
sequence Q
description BINDING SITE FOR RESIDUE PEG B 503
source : BC1

37) chain B
residue 67
type
sequence E
description BINDING SITE FOR RESIDUE PEG B 503
source : BC1

38) chain B
residue 289
type
sequence X
description BINDING SITE FOR RESIDUE PEG B 504
source : BC2

39) chain B
residue 336
type
sequence H
description BINDING SITE FOR RESIDUE PEG B 504
source : BC2

40) chain B
residue 339
type
sequence K
description BINDING SITE FOR RESIDUE PEG B 504
source : BC2

41) chain B
residue 392
type
sequence F
description BINDING SITE FOR RESIDUE PEG B 504
source : BC2

42) chain A
residue 493
type
sequence W
description BINDING SITE FOR RESIDUE TRS B 505
source : BC3

43) chain B
residue 103
type
sequence E
description BINDING SITE FOR RESIDUE TRS B 505
source : BC3

44) chain B
residue 324
type
sequence A
description BINDING SITE FOR RESIDUE TRS B 505
source : BC3

45) chain B
residue 326
type
sequence T
description BINDING SITE FOR RESIDUE TRS B 505
source : BC3

46) chain C
residue 460
type
sequence K
description BINDING SITE FOR RESIDUE NA C 501
source : BC4

47) chain C
residue 463
type
sequence G
description BINDING SITE FOR RESIDUE NA C 501
source : BC4

48) chain D
residue 249
type
sequence V
description BINDING SITE FOR RESIDUE NA C 501
source : BC4

49) chain C
residue 158
type
sequence Y
description BINDING SITE FOR RESIDUE PGE C 502
source : BC5

50) chain C
residue 283
type
sequence F
description BINDING SITE FOR RESIDUE PGE C 502
source : BC5

51) chain C
residue 448
type
sequence H
description BINDING SITE FOR RESIDUE PGE C 502
source : BC5

52) chain C
residue 450
type
sequence Y
description BINDING SITE FOR RESIDUE PGE C 502
source : BC5

53) chain D
residue 493
type
sequence W
description BINDING SITE FOR RESIDUE PGE C 502
source : BC5

54) chain C
residue 342
type
sequence S
description BINDING SITE FOR RESIDUE PG4 C 503
source : BC6

55) chain C
residue 343
type
sequence Y
description BINDING SITE FOR RESIDUE PG4 C 503
source : BC6

56) chain C
residue 346
type
sequence V
description BINDING SITE FOR RESIDUE PG4 C 503
source : BC6

57) chain C
residue 385
type
sequence R
description BINDING SITE FOR RESIDUE PG4 C 503
source : BC6

58) chain C
residue 155
type
sequence P
description BINDING SITE FOR RESIDUE EDO C 504
source : BC7

59) chain C
residue 233
type
sequence G
description BINDING SITE FOR RESIDUE EDO C 504
source : BC7

60) chain C
residue 234
type
sequence G
description BINDING SITE FOR RESIDUE EDO C 504
source : BC7

61) chain C
residue 289
type
sequence X
description BINDING SITE FOR RESIDUE EDO C 504
source : BC7

62) chain C
residue 392
type
sequence F
description BINDING SITE FOR RESIDUE EDO C 504
source : BC7

63) chain C
residue 249
type
sequence V
description BINDING SITE FOR RESIDUE NA D 501
source : BC8

64) chain D
residue 460
type
sequence K
description BINDING SITE FOR RESIDUE NA D 501
source : BC8

65) chain D
residue 463
type
sequence G
description BINDING SITE FOR RESIDUE NA D 501
source : BC8

66) chain D
residue 158
type
sequence Y
description BINDING SITE FOR RESIDUE PGE D 502
source : BC9

67) chain D
residue 448
type
sequence H
description BINDING SITE FOR RESIDUE PGE D 502
source : BC9

68) chain D
residue 450
type
sequence Y
description BINDING SITE FOR RESIDUE PGE D 502
source : BC9

69) chain D
residue 61
type
sequence S
description BINDING SITE FOR RESIDUE PEG D 503
source : CC1

70) chain D
residue 62
type
sequence G
description BINDING SITE FOR RESIDUE PEG D 503
source : CC1

71) chain D
residue 63
type
sequence E
description BINDING SITE FOR RESIDUE PEG D 503
source : CC1

72) chain A
residue 282-293
type prosite
sequence YFHAGQVXSAGS
description ALDEHYDE_DEHYDR_CYS Aldehyde dehydrogenases cysteine active site. YfHAGQVCSAGS
source prosite : PS00070

73) chain A
residue 254-261
type prosite
sequence LELGGKNP
description ALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. LELGGKNP
source prosite : PS00687


Display surface

Download
Links