eF-site ID 4qqy-ACEG
PDB Code 4qqy
Chain A, C, E, G
Title Crystal structure of T. fusca Cas3-ADP
Classification Hydrolase/DNA
Compound CRISPR-associated helicase, Cas3 family
Source Thermobifida fusca (strain YX) (4QQY)
Sequence A:  PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYL
SPGLRDTIASSMETDEEHAGHCIAFWAGLHDIGKLTREFQ
QQIAIDLSAYPGEELSGEQRSHAAATGKWLPFALPSLGYP
NGGLVTGLVAQMLGGHHGTFHPHPSFQSRNPLAEFGFSSP
HWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVIL
ADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPS
LLDAAGLRPITVPPATFTESFPHLSKPNGLQASLAKHLPC
LCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGRFL
ALPTMATADQMHTRLKEYARYRVEPRSSTLALLHSMAWLN
PDYAPAGHRDPFAATDWLMGRKRGLLAPWAVGTIDQALMA
VLRAKHNALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLR
WLGTLDVPVVLLSATLHHSIANSLVKAYLEGARGRRWNRS
EPQPVSEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRK
PLEVRLVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIIC
TTVAEAQGVYDLLSQWFATAPDLYLLHSRFPNRQRTEITA
TIVDLFGKEGAQSGRRPTAVLVATQVVEQSLDLDVDLMIS
DLAPVSLLLQRAGRCWRHEHLGIINRPQWAKQPELVVLTP
EQNRAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPVQIPE
DVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLARNAV
IPDPDDAEDNLNGLTEFSFHVLATRFGAGSVRVLCYYVDT
AGNRWLDPECTVEFPEQGTEGRFTMADCRDLVARTIPVRM
GPWASQLTEDNHPPEAWRESFYLRDLVLIPQRVTDVLPTE
TGGREWLLDPCKGLIF
C:  PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYL
SPGLRDTIASSMETDEEHAGHCIAFWAGLHDIGKLTREFQ
QQIAIDLSAYPGEELSGEQRSHAAATGKWLPFALPSLGYP
NGGLVTGLVAQMLGGHHGTFHPHPSFQSRNPLAEFGFSSP
HWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVIL
ADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPS
LLDAAGLRPITVPPATFTESFPHLSKPNGLQASLAKHLPC
LCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGRFL
ALPTMATADQMHTRLKEYARYRVENTRSSTLALLHSMAWL
NPDYAPADPFAATDWLMGRKRGLLAPWAVGTIDQALMAVL
RAKHNALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLRWL
GTLDVPVVLLSATLHHSIANSLVKAYLEGARGRRWNRSEP
QPVSEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRKPL
EVRLVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIICTT
VAEAQGVYDLLSQWFATLGEDAPDLYLLHSRFPNRQRTEI
TATIVDLFGKEGAQSGRRPTRGAVLVATQVVEQSLDLDVD
LMISDLAPVSLLLQRAGRCWRHEHLGIINRPQWAKQPELV
VLTPEQNAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPVQ
IPEDVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLAR
NAVIPDPDDAEDNLNGLTEFSVLATRFGAGSVRVLCYYVD
TAGNRWLDPECTVEFPEQGTGREGRFTMADCRDLVARTIP
VRMGPWASQLTEDNHPPEAWRESFYLRDLVLIPQRVTDEG
AVLPTETGGREWLLDPCKGLIF
E:  PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYL
SPGLRDTIASSMETDEEHAGHCIAFWAGLHDIGKLTREFQ
QQIAIDLSAYPGEELSGEQRSHAAATGKWLPFALPSLGYP
NGGLVTGLVAQMLGGHHGTFHPHPSFQSRNPLAEFGFSSP
HWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVIL
ADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPS
LLDAAGLRPITVPPATFTESFPHLSKPNGLQASLAKHLPC
LCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGRFL
ALPTMATADQMHTRLKEYARYRVENTRSSTLALLHSMAWL
NPDYAPADPFAATDWLMGRKRGLLAPWAVGTIDQALMAVL
RAKHNALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLRWL
GTLDVPVVLLSATLHHSIANSLVKAYLEGARGRRWNRSEP
QPVSEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRKPL
EVRLVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIICTT
VAEAQGVYDLLSQWFATLGEDAPDLYLLHSRFPNRQRTEI
TATIVDLFGKEGAQSGRRPTRGAVLVATQVVEQSLDLDVD
LMISDLAPVSLLLQRAGRCWRHEHLGIINRPQWAKQPELV
VLTPEQNRAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPV
QIPEDVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLA
RNAVIPDPDDAEDNLNGLTEFVLATRFGAGSVRVLCYYVD
TAGNRWLDPECTVEFPEQGTGREGRFTMADCRDLVARTIP
VRMGPWASQLTEDNHPPEAWRESFYLRDLVLIPQRVTDEG
AVLPTETGGREWLLDPCKGLIF
G:  PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYL
SPGLRDTIASSMETDEEHAGHCIAFWAGLHDIGKLTREFQ
QQIAIDLSAYPGEELSGEQRSHAAATGKWLPFALPSLGYP
NGGLVTGLVAQMLGGHHGTFHPHPSFQSRNPLAEFGFSSP
HWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVIL
ADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPS
LLDAAGLRPITVPPATFTESFPHLSKPNGLQASLAKHLPC
LCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGRFL
ALPTMATADQMHTRLKEYARYRVENSSTLALLHSMAWLNP
DYAPAPFAATDWLMGRKRGLLAPWAVGTIDQALMAVLRAK
HNALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLRWLGTL
DVPVVLLSATLHHSIANSLVKAYLEGARGRRWNRSEPQPV
SEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRKPLEVR
LVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIICTTVAE
AQGVYDLLSQWFATAPDLYLLHSRFPNRQRTEITATIVDL
FGKEGAQSGRRPTRGAVLVATQVVEQSLDLDVDLMISDLA
PVSLLLQRAGRCWRHEHLGIINRPQWAKQPELVVLTPEQN
RAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPVQIPEDVQ
QLVDDVYDDDSLAEDLEADMERMGEELAQRGLARNAVIPD
PDDAEDNLNGLTEFSVLATRFGAGSVRVLCYYVAGNRWLD
PECTVEFPEQGTGREGRFTMADCRDLVARTIPVRMGPWAS
QLTEDNHPPEAWRESFYLRDLVLIPQRVTDEGAVLPTETG
GREWLLDPCKGLIF
Description


Functional site

1) chain A
residue 84
type
sequence D
description BINDING SITE FOR RESIDUE FE A 1001
source : AC1

2) chain A
residue 115
type
sequence H
description BINDING SITE FOR RESIDUE FE A 1001
source : AC1

3) chain A
residue 149
type
sequence H
description BINDING SITE FOR RESIDUE FE A 1001
source : AC1

4) chain A
residue 150
type
sequence H
description BINDING SITE FOR RESIDUE FE A 1001
source : AC1

5) chain A
residue 37
type
sequence H
description BINDING SITE FOR RESIDUE FE A 1002
source : AC2

6) chain A
residue 83
type
sequence H
description BINDING SITE FOR RESIDUE FE A 1002
source : AC2

7) chain A
residue 84
type
sequence D
description BINDING SITE FOR RESIDUE FE A 1002
source : AC2

8) chain A
residue 215
type
sequence D
description BINDING SITE FOR RESIDUE FE A 1002
source : AC2

9) chain A
residue 277
type
sequence L
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

10) chain A
residue 279
type
sequence K
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

11) chain A
residue 280
type
sequence P
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

12) chain A
residue 281
type
sequence N
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

13) chain A
residue 284
type
sequence Q
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

14) chain A
residue 307
type
sequence M
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

15) chain A
residue 308
type
sequence G
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

16) chain A
residue 309
type
sequence E
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

17) chain A
residue 310
type
sequence G
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

18) chain A
residue 313
type
sequence E
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

19) chain A
residue 692
type
sequence R
description BINDING SITE FOR RESIDUE ADP A 1003
source : AC3

20) chain C
residue 84
type
sequence D
description BINDING SITE FOR RESIDUE FE C 1001
source : AC4

21) chain C
residue 115
type
sequence H
description BINDING SITE FOR RESIDUE FE C 1001
source : AC4

22) chain C
residue 149
type
sequence H
description BINDING SITE FOR RESIDUE FE C 1001
source : AC4

23) chain C
residue 150
type
sequence H
description BINDING SITE FOR RESIDUE FE C 1001
source : AC4

24) chain C
residue 37
type
sequence H
description BINDING SITE FOR RESIDUE FE C 1002
source : AC5

25) chain C
residue 83
type
sequence H
description BINDING SITE FOR RESIDUE FE C 1002
source : AC5

26) chain C
residue 84
type
sequence D
description BINDING SITE FOR RESIDUE FE C 1002
source : AC5

27) chain C
residue 215
type
sequence D
description BINDING SITE FOR RESIDUE FE C 1002
source : AC5

28) chain C
residue 277
type
sequence L
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

29) chain C
residue 279
type
sequence K
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

30) chain C
residue 281
type
sequence N
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

31) chain C
residue 284
type
sequence Q
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

32) chain C
residue 307
type
sequence M
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

33) chain C
residue 308
type
sequence G
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

34) chain C
residue 309
type
sequence E
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

35) chain C
residue 310
type
sequence G
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

36) chain C
residue 313
type
sequence E
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

37) chain C
residue 692
type
sequence R
description BINDING SITE FOR RESIDUE ADP C 1003
source : AC6

38) chain E
residue 84
type
sequence D
description BINDING SITE FOR RESIDUE FE E 1001
source : AC7

39) chain E
residue 115
type
sequence H
description BINDING SITE FOR RESIDUE FE E 1001
source : AC7

40) chain E
residue 149
type
sequence H
description BINDING SITE FOR RESIDUE FE E 1001
source : AC7

41) chain E
residue 150
type
sequence H
description BINDING SITE FOR RESIDUE FE E 1001
source : AC7

42) chain E
residue 37
type
sequence H
description BINDING SITE FOR RESIDUE FE E 1002
source : AC8

43) chain E
residue 83
type
sequence H
description BINDING SITE FOR RESIDUE FE E 1002
source : AC8

44) chain E
residue 84
type
sequence D
description BINDING SITE FOR RESIDUE FE E 1002
source : AC8

45) chain E
residue 215
type
sequence D
description BINDING SITE FOR RESIDUE FE E 1002
source : AC8

46) chain E
residue 277
type
sequence L
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

47) chain E
residue 278
type
sequence S
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

48) chain E
residue 279
type
sequence K
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

49) chain E
residue 280
type
sequence P
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

50) chain E
residue 281
type
sequence N
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

51) chain E
residue 284
type
sequence Q
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

52) chain E
residue 308
type
sequence G
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

53) chain E
residue 310
type
sequence G
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

54) chain E
residue 312
type
sequence T
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

55) chain E
residue 313
type
sequence E
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

56) chain E
residue 347
type
sequence R
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

57) chain E
residue 692
type
sequence R
description BINDING SITE FOR RESIDUE ADP E 1003
source : AC9

58) chain G
residue 84
type
sequence D
description BINDING SITE FOR RESIDUE FE G 1001
source : BC1

59) chain G
residue 115
type
sequence H
description BINDING SITE FOR RESIDUE FE G 1001
source : BC1

60) chain G
residue 149
type
sequence H
description BINDING SITE FOR RESIDUE FE G 1001
source : BC1

61) chain G
residue 150
type
sequence H
description BINDING SITE FOR RESIDUE FE G 1001
source : BC1

62) chain G
residue 37
type
sequence H
description BINDING SITE FOR RESIDUE FE G 1002
source : BC2

63) chain G
residue 83
type
sequence H
description BINDING SITE FOR RESIDUE FE G 1002
source : BC2

64) chain G
residue 84
type
sequence D
description BINDING SITE FOR RESIDUE FE G 1002
source : BC2

65) chain G
residue 87
type
sequence K
description BINDING SITE FOR RESIDUE FE G 1002
source : BC2

66) chain G
residue 215
type
sequence D
description BINDING SITE FOR RESIDUE FE G 1002
source : BC2

67) chain G
residue 277
type
sequence L
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

68) chain G
residue 279
type
sequence K
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

69) chain G
residue 281
type
sequence N
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

70) chain G
residue 284
type
sequence Q
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

71) chain G
residue 307
type
sequence M
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

72) chain G
residue 308
type
sequence G
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

73) chain G
residue 309
type
sequence E
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

74) chain G
residue 310
type
sequence G
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

75) chain G
residue 313
type
sequence E
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

76) chain G
residue 347
type
sequence R
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3

77) chain G
residue 692
type
sequence R
description BINDING SITE FOR RESIDUE ADP G 1003
source : BC3


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