eF-site ID 4qo8-D
PDB Code 4qo8
Chain D

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Title Lactate Dehydrogenase A in complex with substituted 3-Hydroxy-2-mercaptocyclohex-2-enone compound 104
Classification oxidoreductase/oxidoreductase inhibitor
Compound L-lactate dehydrogenase A chain
Source Homo sapiens (Human) (LDHA_HUMAN)
Sequence D:  ATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILM
KDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGK
DYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFII
PNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGS
GCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVW
SGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEV
IKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLY
GIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSAD
TLWGIQKELQF
Description


Functional site

1) chain D
residue 185
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 804
source : AC8

2) chain D
residue 28
type
sequence G
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

3) chain D
residue 29
type
sequence A
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

4) chain D
residue 30
type
sequence V
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

5) chain D
residue 51
type
sequence D
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

6) chain D
residue 52
type
sequence V
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

7) chain D
residue 53
type
sequence I
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

8) chain D
residue 94
type
sequence T
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

9) chain D
residue 95
type
sequence A
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

10) chain D
residue 115
type
sequence I
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

11) chain D
residue 119
type
sequence I
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

12) chain D
residue 135
type
sequence V
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

13) chain D
residue 137
type
sequence N
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

14) chain D
residue 160
type
sequence S
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

15) chain D
residue 192
type
sequence H
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

16) chain D
residue 247
type
sequence T
description BINDING SITE FOR RESIDUE NAI D 801
source : BC4

17) chain D
residue 170
type
sequence R
description BINDING SITE FOR RESIDUE SO4 D 802
source : BC5

18) chain D
residue 185
type
sequence H
description BINDING SITE FOR RESIDUE SO4 D 802
source : BC5

19) chain D
residue 137
type
sequence N
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

20) chain D
residue 165
type
sequence D
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

21) chain D
residue 168
type
sequence R
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

22) chain D
residue 192
type
sequence H
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

23) chain D
residue 193
type
sequence G
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

24) chain D
residue 237
type
sequence A
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

25) chain D
residue 238
type
sequence Y
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

26) chain D
residue 241
type
sequence I
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

27) chain D
residue 247
type
sequence T
description BINDING SITE FOR RESIDUE 36U D 803
source : BC6

28) chain D
residue 192
type ACT_SITE
sequence H
description Proton acceptor
source Swiss-Prot : SWS_FT_FI1

29) chain D
residue 223
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P06151
source Swiss-Prot : SWS_FT_FI10

30) chain D
residue 231
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P06151
source Swiss-Prot : SWS_FT_FI10

31) chain D
residue 242
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P06151
source Swiss-Prot : SWS_FT_FI10

32) chain D
residue 238
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:P06151
source Swiss-Prot : SWS_FT_FI11

33) chain D
residue 28
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:11276087
source Swiss-Prot : SWS_FT_FI2

34) chain D
residue 98
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:11276087
source Swiss-Prot : SWS_FT_FI2

35) chain D
residue 105
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI3

36) chain D
residue 137
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI3

37) chain D
residue 168
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI3

38) chain D
residue 247
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI3

39) chain D
residue 1
type MOD_RES
sequence A
description N-acetylalanine => ECO:0000269|Ref.10, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895
source Swiss-Prot : SWS_FT_FI4

40) chain D
residue 308
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P04642
source Swiss-Prot : SWS_FT_FI12

41) chain D
residue 321
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P04642
source Swiss-Prot : SWS_FT_FI12

42) chain D
residue 309
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI13

43) chain D
residue 56
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI14

44) chain D
residue 56
type MOD_RES
sequence K
description N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI9

45) chain D
residue 4
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P06151
source Swiss-Prot : SWS_FT_FI5

46) chain D
residue 117
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P06151
source Swiss-Prot : SWS_FT_FI5

47) chain D
residue 317
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P06151
source Swiss-Prot : SWS_FT_FI5

48) chain D
residue 9
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0007744|PubMed:19690332
source Swiss-Prot : SWS_FT_FI6

49) chain D
residue 13
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI7

50) chain D
residue 80
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI7

51) chain D
residue 125
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI7

52) chain D
residue 17
type MOD_RES
sequence T
description Phosphothreonine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI8


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