eF-site ID 4qko-ABCDEFGH
PDB Code 4qko
Chain A, B, C, D, E, F, G, H

click to enlarge
Title The Crystal Structure of the Pyocin S2 Nuclease Domain, Immunity Protein Complex at 1.8 Angstroms
Classification ANTIMICROBIAL PROTEIN
Compound Pyocin-S2 immunity protein
Source Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (PYS2_PSEAE)
Sequence A:  MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLE
FKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKG
LPGFKAG
B:  RDPRDVPGAATGKGQPVSGNWLGAASQGEGAPIPSQIADK
LRGKTFKNWRDFREQFWIAVANDPELSKQFNPGSLAVMRD
GGAPYVRESEQAGGRIKIEIHHKVRIADGGGVYNMGNLVA
VTPKRHIEIHK
C:  MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLE
FKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKG
LPGFKAG
D:  RDPRDVPGAATGKGQPVSGNWLGAASQGEGAPIPSQIADK
LRGKTFKNWRDFREQFWIAVANDPELSKQFNPGSLAVMRD
GGAPYVRESEQAGGRIKIEIHHKVRIADGGGVYNMGNLVA
VTPKRHIEIHKGG
E:  MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLE
FKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKG
LPGFKAG
F:  RDPRDVPGAATGKGQPVSGNWLGAASQGEGAPIPSQIADK
LRGKTFKNWRDFREQFWIAVANDPELSKQFNPGSLAVMRD
GGAPYVRESEQAGGRIKIEIHHKVRIADGGGVYNMGNLVA
VTPKRHIEIHK
G:  KSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLEF
KKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGL
PGFKAG
H:  RDPRDVPGAATGKGQPVSGNWLGAASQGEGAPIPSQIADK
LRGKTFKNWRDFREQFWIAVANDPELSKQFNPGSLAVMRD
GGAPYVRESEQAGGRIKIEIHHKVRIADGGGVYNMGNLVA
VTPKRHIEIHK
Description


Functional site

1) chain A
residue 65
type
sequence P
description BINDING SITE FOR RESIDUE BR A 101
source : AC1

2) chain A
residue 66
type
sequence A
description BINDING SITE FOR RESIDUE BR A 101
source : AC1

3) chain A
residue 10
type
sequence E
description BINDING SITE FOR RESIDUE BR A 102
source : AC2

4) chain A
residue 11
type
sequence K
description BINDING SITE FOR RESIDUE BR A 102
source : AC2

5) chain A
residue 83
type
sequence G
description BINDING SITE FOR RESIDUE BR A 103
source : AC3

6) chain A
residue 84
type
sequence F
description BINDING SITE FOR RESIDUE BR A 103
source : AC3

7) chain B
residue 604
type
sequence W
description BINDING SITE FOR RESIDUE BR B 701
source : AC4

8) chain B
residue 655
type
sequence I
description BINDING SITE FOR RESIDUE BR B 701
source : AC4

9) chain B
residue 642
type
sequence R
description BINDING SITE FOR RESIDUE BR B 702
source : AC5

10) chain B
residue 666
type
sequence G
description BINDING SITE FOR RESIDUE BR B 703
source : AC6

11) chain B
residue 667
type
sequence V
description BINDING SITE FOR RESIDUE BR B 703
source : AC6

12) chain H
residue 566
type
sequence T
description BINDING SITE FOR RESIDUE BR B 703
source : AC6

13) chain B
residue 656
type
sequence H
description BINDING SITE FOR RESIDUE MG B 704
source : AC7

14) chain B
residue 681
type
sequence H
description BINDING SITE FOR RESIDUE MG B 704
source : AC7

15) chain C
residue 66
type
sequence A
description BINDING SITE FOR RESIDUE BR C 101
source : AC8

16) chain C
residue 11
type
sequence K
description BINDING SITE FOR RESIDUE BR C 102
source : AC9

17) chain C
residue 73
type
sequence K
description BINDING SITE FOR RESIDUE BR C 103
source : BC1

18) chain C
residue 83
type
sequence G
description BINDING SITE FOR RESIDUE BR C 103
source : BC1

19) chain C
residue 84
type
sequence F
description BINDING SITE FOR RESIDUE BR C 103
source : BC1

20) chain D
residue 604
type
sequence W
description BINDING SITE FOR RESIDUE BR D 701
source : BC2

21) chain D
residue 655
type
sequence I
description BINDING SITE FOR RESIDUE BR D 701
source : BC2

22) chain D
residue 642
type
sequence R
description BINDING SITE FOR RESIDUE BR D 702
source : BC3

23) chain D
residue 666
type
sequence G
description BINDING SITE FOR RESIDUE BR D 703
source : BC4

24) chain D
residue 667
type
sequence V
description BINDING SITE FOR RESIDUE BR D 703
source : BC4

25) chain F
residue 669
type
sequence N
description BINDING SITE FOR RESIDUE BR D 703
source : BC4

26) chain D
residue 558
type
sequence P
description BINDING SITE FOR RESIDUE BR D 704
source : BC5

27) chain D
residue 559
type
sequence R
description BINDING SITE FOR RESIDUE BR D 704
source : BC5

28) chain D
residue 660
type
sequence R
description BINDING SITE FOR RESIDUE BR D 705
source : BC6

29) chain D
residue 661
type
sequence I
description BINDING SITE FOR RESIDUE BR D 705
source : BC6

30) chain D
residue 661
type
sequence I
description BINDING SITE FOR RESIDUE BR D 706
source : BC7

31) chain D
residue 662
type
sequence A
description BINDING SITE FOR RESIDUE BR D 706
source : BC7

32) chain D
residue 656
type
sequence H
description BINDING SITE FOR RESIDUE MG D 707
source : BC8

33) chain D
residue 681
type
sequence H
description BINDING SITE FOR RESIDUE MG D 707
source : BC8

34) chain D
residue 685
type
sequence H
description BINDING SITE FOR RESIDUE MG D 707
source : BC8

35) chain D
residue 559
type
sequence R
description BINDING SITE FOR RESIDUE BR D 708
source : BC9

36) chain D
residue 655
type
sequence I
description BINDING SITE FOR RESIDUE BR D 708
source : BC9

37) chain D
residue 657
type
sequence H
description BINDING SITE FOR RESIDUE BR D 708
source : BC9

38) chain E
residue 65
type
sequence P
description BINDING SITE FOR RESIDUE BR E 101
source : CC1

39) chain E
residue 66
type
sequence A
description BINDING SITE FOR RESIDUE BR E 101
source : CC1

40) chain E
residue 11
type
sequence K
description BINDING SITE FOR RESIDUE BR E 102
source : CC2

41) chain E
residue 84
type
sequence F
description BINDING SITE FOR RESIDUE BR E 103
source : CC3

42) chain F
residue 604
type
sequence W
description BINDING SITE FOR RESIDUE BR F 701
source : CC4

43) chain F
residue 608
type
sequence R
description BINDING SITE FOR RESIDUE BR F 701
source : CC4

44) chain F
residue 655
type
sequence I
description BINDING SITE FOR RESIDUE BR F 701
source : CC4

45) chain F
residue 642
type
sequence R
description BINDING SITE FOR RESIDUE BR F 702
source : CC5

46) chain D
residue 566
type
sequence T
description BINDING SITE FOR RESIDUE BR F 703
source : CC6

47) chain F
residue 666
type
sequence G
description BINDING SITE FOR RESIDUE BR F 703
source : CC6

48) chain F
residue 667
type
sequence V
description BINDING SITE FOR RESIDUE BR F 703
source : CC6

49) chain F
residue 558
type
sequence P
description BINDING SITE FOR RESIDUE BR F 704
source : CC7

50) chain F
residue 559
type
sequence R
description BINDING SITE FOR RESIDUE BR F 704
source : CC7

51) chain F
residue 660
type
sequence R
description BINDING SITE FOR RESIDUE BR F 705
source : CC8

52) chain F
residue 661
type
sequence I
description BINDING SITE FOR RESIDUE BR F 705
source : CC8

53) chain F
residue 661
type
sequence I
description BINDING SITE FOR RESIDUE BR F 706
source : CC9

54) chain F
residue 662
type
sequence A
description BINDING SITE FOR RESIDUE BR F 706
source : CC9

55) chain F
residue 656
type
sequence H
description BINDING SITE FOR RESIDUE MG F 707
source : DC1

56) chain F
residue 681
type
sequence H
description BINDING SITE FOR RESIDUE MG F 707
source : DC1

57) chain F
residue 685
type
sequence H
description BINDING SITE FOR RESIDUE MG F 707
source : DC1

58) chain F
residue 576
type
sequence W
description BINDING SITE FOR RESIDUE BR F 708
source : DC2

59) chain F
residue 577
type
sequence L
description BINDING SITE FOR RESIDUE BR F 708
source : DC2

60) chain F
residue 624
type
sequence Q
description BINDING SITE FOR RESIDUE BR F 708
source : DC2

61) chain G
residue 18
type
sequence K
description BINDING SITE FOR RESIDUE BR G 101
source : DC3

62) chain G
residue 66
type
sequence A
description BINDING SITE FOR RESIDUE BR G 101
source : DC3

63) chain G
residue 9
type
sequence T
description BINDING SITE FOR RESIDUE BR G 102
source : DC4

64) chain G
residue 10
type
sequence E
description BINDING SITE FOR RESIDUE BR G 102
source : DC4

65) chain G
residue 11
type
sequence K
description BINDING SITE FOR RESIDUE BR G 102
source : DC4

66) chain G
residue 83
type
sequence G
description BINDING SITE FOR RESIDUE BR G 103
source : DC5

67) chain G
residue 84
type
sequence F
description BINDING SITE FOR RESIDUE BR G 103
source : DC5

68) chain H
residue 604
type
sequence W
description BINDING SITE FOR RESIDUE BR H 701
source : DC6

69) chain H
residue 655
type
sequence I
description BINDING SITE FOR RESIDUE BR H 701
source : DC6

70) chain H
residue 642
type
sequence R
description BINDING SITE FOR RESIDUE BR H 702
source : DC7

71) chain B
residue 566
type
sequence T
description BINDING SITE FOR RESIDUE BR H 703
source : DC8

72) chain H
residue 667
type
sequence V
description BINDING SITE FOR RESIDUE BR H 703
source : DC8

73) chain H
residue 557
type
sequence D
description BINDING SITE FOR RESIDUE BR H 704
source : DC9

74) chain H
residue 558
type
sequence P
description BINDING SITE FOR RESIDUE BR H 704
source : DC9

75) chain H
residue 559
type
sequence R
description BINDING SITE FOR RESIDUE BR H 704
source : DC9

76) chain H
residue 660
type
sequence R
description BINDING SITE FOR RESIDUE BR H 705
source : EC1

77) chain H
residue 661
type
sequence I
description BINDING SITE FOR RESIDUE BR H 705
source : EC1

78) chain H
residue 662
type
sequence A
description BINDING SITE FOR RESIDUE BR H 706
source : EC2

79) chain H
residue 656
type
sequence H
description BINDING SITE FOR RESIDUE MG H 707
source : EC3

80) chain H
residue 681
type
sequence H
description BINDING SITE FOR RESIDUE MG H 707
source : EC3

81) chain H
residue 685
type
sequence H
description BINDING SITE FOR RESIDUE MG H 707
source : EC3

82) chain D
residue 656
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

83) chain D
residue 681
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

84) chain D
residue 685
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

85) chain F
residue 656
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

86) chain F
residue 681
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

87) chain F
residue 685
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

88) chain H
residue 656
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

89) chain H
residue 681
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

90) chain H
residue 685
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

91) chain B
residue 656
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

92) chain B
residue 681
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

93) chain B
residue 685
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links