|
|
eF-site ID
|
4q5s-F |
|
PDB Code
|
4q5s |
|
Chain
|
F |
|
click to enlarge
|
|
|
Title
|
Thermus thermophilus RNA polymerase initially transcribing complex containing 6-mer RNA |
|
Classification
|
transcription/DNA/rna |
|
Compound
|
DNA-directed RNA polymerase subunit alpha |
|
Source
|
ORGANISM_SCIENTIFIC: Thermus thermophilus; |
|
|
Sequence
|
F: |
SDPVRQYLHEIGQVPLLTLEEEVELARKVEEGMEAIKKLS
EITGLDPDLIREVVRAKILGSARVRHIPGLKETLDPKTVE
EIDQKLKSLPKEHKRYLHIAREGEAARQHLIEANLRLVVS
IAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFST
YATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQ
LQQELGREPTYEEIAEAMGPGWDAKRVEETLKIAQEPVSL
ETPFYGDFIPDEHLPSPVDAATQSLLSEELEKALSKLSER
EAMVLKLRKGLIDGREHTLEEVGAFFGVTRERIRQIENKA
LRKLKYHESRTRKLRDFL
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
F |
| residue |
382-408 |
| type |
prosite |
| sequence |
TLEEVGAFFGVTRERIRQIENKALRKL
|
| description |
SIGMA70_2 Sigma-70 factors family signature 2. TleEVGaffgVTrerIrQIEnkaLrkL
|
| source |
prosite : PS00716
|
|
|
2)
|
chain |
F |
| residue |
187-194 |
| type |
prosite |
| sequence |
LIEANLRL
|
| description |
CPSASE_2 Carbamoyl-phosphate synthase subdomain signature 2. LIEANLRL
|
| source |
prosite : PS00867
|
|
|
|