|
eF-site ID
|
4q4z-F |
PDB Code
|
4q4z |
Chain
|
F |
|
click to enlarge
|
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Title
|
Thermus thermophilus RNA polymerase de novo transcription initiation complex |
Classification
|
transcription/DNA |
Compound
|
DNA-directed RNA polymerase subunit alpha |
Source
|
ORGANISM_SCIENTIFIC: Thermus thermophilus; |
|
Sequence
|
F: |
SDPVRQYLHEIGQVPLLTLEEEVELARKVEEGMEAIKKLS
EITGLDPDLIREVVRAKILGSARVRHIPGLKETLDPKTVE
EIDQKLKSLPKEHKRYLHIAREGEAARQHLIEANLRLVVS
IAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFST
YATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQ
LQQELGREPTYEEIAEAMGPGWDAKRVEETLKIAQEPVSL
ETPIGDEKDSFYGDFIPDEHLPSPVDAATQSLLSEELEKA
LSKLSEREAMVLKLRKGLIDGREHTLEEVGAFFGVTRERI
RQIENKALRKLKYHESRTRKLRDFLD
|
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Description
|
|
Functional site
|
|
1)
|
chain |
F |
residue |
382-408 |
type |
prosite |
sequence |
TLEEVGAFFGVTRERIRQIENKALRKL
|
description |
SIGMA70_2 Sigma-70 factors family signature 2. TleEVGaffgVTrerIrQIEnkaLrkL
|
source |
prosite : PS00716
|
|
2)
|
chain |
F |
residue |
187-194 |
type |
prosite |
sequence |
LIEANLRL
|
description |
CPSASE_2 Carbamoyl-phosphate synthase subdomain signature 2. LIEANLRL
|
source |
prosite : PS00867
|
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