eF-site ID 4q0c-B
PDB Code 4q0c
Chain B

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Title 3.1 A resolution crystal structure of the B. pertussis BvgS periplasmic domain
Classification TRANSFERASE
Compound Virulence sensor protein BvgS
Source Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) (BVGS_BORPE)
Sequence B:  SQELTLVGKAAVPDVEVALDGDDWRWLARKRVLTLGVYAP
DIPPFDVTYGERYEGLTADYMAIIAHNLGMQAKVLRYPTR
EQALSALESGQIDLIGTVNGTDGRQQSLRLSVPYAADHPV
IVMPIGARHVPASNLAGQRLAVDINYLPKETLARAYPQAT
LHYFPSSEQALAAVAYGQADVFIGDALTTSHLVSQSYFND
VRVVAPAHIATGGESFGVRADNTRLLRVVNAVLEAIPPSE
HRSLIYRWGLGSSISLDFAHPAYSAREQQWMADHPVVKVA
VLNLFAPFTLFRTDEQFGGISAAVLQLLQLRTGLDFEIIG
VDTVEELIAKLRSGEADMAGALFVNSARESFLSFSRPYVR
NGMVIVTRQDPDAPVDADHLDGRTVALVRNSAAIPLLQRR
YPQAKVVTADNPSEAMLMVANGQADAVVQTQISASYYVNR
YFAGKLRIASALDLPPAEIALATTRGQTELMSILNKALYS
ISNDELASIISRWRGSDGDPRTWYAYRNEIYLE
Description


Functional site
1) chain B
residue 33-307
type TOPO_DOM
sequence SQELTLVGKAAVPDVEVALDGDDWRWLARKRVLTLGVYAP
DIPPFDVTYGERYEGLTADYMAIIAHNLGMQAKVLRYPTR
EQALSALESGQIDLIGTVNGTDGRQQSLRLSVPYAADHPV
IVMPIGARHVPASNLAGQRLAVDINYLPKETLARAYPQAT
LHYFPSSEQALAAVAYGQADVFIGDALTTSHLVSQSYFND
VRVVAPAHIATGGESFGVRADNTRLLRVVNAVLEAIPPSE
HRSLIYRWGLGSSISLDFAHPAYSAREQQWMADHP
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI1
2) chain B
residue 308-331
type TRANSMEM
sequence VVKVAVLNLFAPFTLFRTDEQFGG
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2
3) chain B
residue 332-541
type TOPO_DOM
sequence ISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMA
GALFVNSARESFLSFSRPYVRNGMVIVTRQDPDAPVDADH
LDGRTVALVRNSAAIPLLQRRYPQAKVVTADNPSEAMLMV
ANGQADAVVQTQISASYYVNRYFAGKLRIASALDLPPAEI
ALATTRGQTELMSILNKALYSISNDELASIISRWRGSDGD
PRTWYAYRNE
description Periplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

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