eF-site ID 4pjt-D
PDB Code 4pjt
Chain D

click to enlarge
Title Structure of PARP1 catalytic domain bound to inhibitor BMN 673
Classification TRANSFERASE/TRANSFERASE INHIBITOR
Compound Poly [ADP-ribose] polymerase 1
Source Homo sapiens (Human) (PARP1_HUMAN)
Sequence D:  SKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLS
KRQIQAAYSILSEVQQAVSLDLSNRFYTLIPHDPPLLNNA
DSVQAKVEMLDNLLDIEVAYSLLRDPIDVNYEKLKTDIKV
VDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREG
ECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPE
APVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGE
VALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSANIS
LDGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLL
KLKFNF
Description


Functional site

1) chain D
residue 850
type
sequence P
description binding site for residue GOL A 1107
source : AC7

2) chain D
residue 854
type
sequence L
description binding site for residue GOL A 1107
source : AC7

3) chain D
residue 946
type
sequence H
description binding site for residue GOL A 1107
source : AC7

4) chain D
residue 846
type
sequence Q
description binding site for residue SO4 C 1102
source : AD6

5) chain D
residue 849
type
sequence K
description binding site for residue SO4 C 1102
source : AD6

6) chain D
residue 842
type
sequence E
description binding site for residue SO4 D 1101
source : AE1

7) chain D
residue 843
type
sequence G
description binding site for residue SO4 D 1101
source : AE1

8) chain D
residue 844
type
sequence E
description binding site for residue SO4 D 1101
source : AE1

9) chain D
residue 845
type
sequence C
description binding site for residue SO4 D 1101
source : AE1

10) chain D
residue 846
type
sequence Q
description binding site for residue SO4 D 1101
source : AE1

11) chain D
residue 903
type
sequence K
description binding site for residue SO4 D 1102
source : AE2

12) chain D
residue 984
type
sequence L
description binding site for residue SO4 D 1102
source : AE2

13) chain D
residue 985
type
sequence L
description binding site for residue SO4 D 1102
source : AE2

14) chain D
residue 986
type
sequence Y
description binding site for residue SO4 D 1102
source : AE2

15) chain D
residue 858
type
sequence R
description binding site for residue SO4 D 1103
source : AE3

16) chain D
residue 929
type
sequence M
description binding site for residue SO4 D 1103
source : AE3

17) chain D
residue 949
type
sequence K
description binding site for residue SO4 D 1103
source : AE3

18) chain D
residue 759
type
sequence Q
description binding site for residue 2YQ D 1104
source : AE4

19) chain D
residue 763
type
sequence E
description binding site for residue 2YQ D 1104
source : AE4

20) chain D
residue 862
type
sequence H
description binding site for residue 2YQ D 1104
source : AE4

21) chain D
residue 863
type
sequence G
description binding site for residue 2YQ D 1104
source : AE4

22) chain D
residue 888
type
sequence G
description binding site for residue 2YQ D 1104
source : AE4

23) chain D
residue 889
type
sequence Y
description binding site for residue 2YQ D 1104
source : AE4

24) chain D
residue 896
type
sequence Y
description binding site for residue 2YQ D 1104
source : AE4

25) chain D
residue 897
type
sequence F
description binding site for residue 2YQ D 1104
source : AE4

26) chain D
residue 898
type
sequence A
description binding site for residue 2YQ D 1104
source : AE4

27) chain D
residue 903
type
sequence K
description binding site for residue 2YQ D 1104
source : AE4

28) chain D
residue 904
type
sequence S
description binding site for residue 2YQ D 1104
source : AE4

29) chain D
residue 907
type
sequence Y
description binding site for residue 2YQ D 1104
source : AE4

30) chain D
residue 988
type
sequence E
description binding site for residue 2YQ D 1104
source : AE4

31) chain D
residue 988
type ACT_SITE
sequence E
description For poly [ADP-ribose] polymerase activity => ECO:0000305|PubMed:32028527, ECO:0000305|PubMed:7852410, ECO:0000305|PubMed:9315851
source Swiss-Prot : SWS_FT_FI1

32) chain D
residue 862
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

33) chain D
residue 871
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

34) chain D
residue 878
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

35) chain D
residue 904
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links