eF-site ID 4pjt-A
PDB Code 4pjt
Chain A

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Title Structure of PARP1 catalytic domain bound to inhibitor BMN 673
Classification TRANSFERASE/TRANSFERASE INHIBITOR
Compound Poly [ADP-ribose] polymerase 1
Source Homo sapiens (Human) (PARP1_HUMAN)
Sequence A:  KSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKL
SKRQIQAAYSILSEVQQAVSQDSQILDLSNRFYTLIPHDF
KPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGSKDPIDV
NYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLE
VIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGI
LSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQ
GDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLG
KTTPDPSANISLDGVDVPLGTGISSGVNDTSLLYNEYIVY
DIAQVNLKYLLKLKFNFK
Description


Functional site

1) chain A
residue 903
type
sequence K
description binding site for residue SO4 A 1101
source : AC1

2) chain A
residue 984
type
sequence L
description binding site for residue SO4 A 1101
source : AC1

3) chain A
residue 985
type
sequence L
description binding site for residue SO4 A 1101
source : AC1

4) chain A
residue 986
type
sequence Y
description binding site for residue SO4 A 1101
source : AC1

5) chain A
residue 858
type
sequence R
description binding site for residue SO4 A 1102
source : AC2

6) chain A
residue 929
type
sequence M
description binding site for residue SO4 A 1102
source : AC2

7) chain A
residue 949
type
sequence K
description binding site for residue SO4 A 1102
source : AC2

8) chain A
residue 841
type
sequence R
description binding site for residue SO4 A 1103
source : AC3

9) chain A
residue 843
type
sequence G
description binding site for residue SO4 A 1103
source : AC3

10) chain A
residue 845
type
sequence C
description binding site for residue SO4 A 1103
source : AC3

11) chain A
residue 846
type
sequence Q
description binding site for residue SO4 A 1103
source : AC3

12) chain A
residue 808
type
sequence S
description binding site for residue SO4 A 1104
source : AC4

13) chain A
residue 809
type
sequence E
description binding site for residue SO4 A 1104
source : AC4

14) chain A
residue 810
type
sequence E
description binding site for residue SO4 A 1104
source : AC4

15) chain A
residue 759
type
sequence Q
description binding site for residue 2YQ A 1105
source : AC5

16) chain A
residue 763
type
sequence E
description binding site for residue 2YQ A 1105
source : AC5

17) chain A
residue 862
type
sequence H
description binding site for residue 2YQ A 1105
source : AC5

18) chain A
residue 863
type
sequence G
description binding site for residue 2YQ A 1105
source : AC5

19) chain A
residue 888
type
sequence G
description binding site for residue 2YQ A 1105
source : AC5

20) chain A
residue 889
type
sequence Y
description binding site for residue 2YQ A 1105
source : AC5

21) chain A
residue 896
type
sequence Y
description binding site for residue 2YQ A 1105
source : AC5

22) chain A
residue 897
type
sequence F
description binding site for residue 2YQ A 1105
source : AC5

23) chain A
residue 898
type
sequence A
description binding site for residue 2YQ A 1105
source : AC5

24) chain A
residue 903
type
sequence K
description binding site for residue 2YQ A 1105
source : AC5

25) chain A
residue 904
type
sequence S
description binding site for residue 2YQ A 1105
source : AC5

26) chain A
residue 907
type
sequence Y
description binding site for residue 2YQ A 1105
source : AC5

27) chain A
residue 988
type
sequence E
description binding site for residue 2YQ A 1105
source : AC5

28) chain A
residue 933
type
sequence K
description binding site for residue GOL A 1106
source : AC6

29) chain A
residue 934
type
sequence H
description binding site for residue GOL A 1106
source : AC6

30) chain A
residue 935
type
sequence A
description binding site for residue GOL A 1106
source : AC6

31) chain A
residue 936
type
sequence S
description binding site for residue GOL A 1106
source : AC6

32) chain A
residue 944
type
sequence G
description binding site for residue GOL A 1107
source : AC7

33) chain A
residue 946
type
sequence H
description binding site for residue GOL A 1107
source : AC7

34) chain A
residue 846
type
sequence Q
description binding site for residue SO4 B 1102
source : AC9

35) chain A
residue 849
type
sequence K
description binding site for residue SO4 B 1102
source : AC9

36) chain A
residue 786
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI4

37) chain A
residue 748
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI5

38) chain A
residue 988
type ACT_SITE
sequence E
description For poly [ADP-ribose] polymerase activity => ECO:0000305|PubMed:32028527, ECO:0000305|PubMed:7852410, ECO:0000305|PubMed:9315851
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 862
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

40) chain A
residue 871
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

41) chain A
residue 878
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

42) chain A
residue 904
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2


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