|
eF-site ID
|
4pd4-E |
PDB Code
|
4pd4 |
Chain
|
E |
|
click to enlarge
|
|
Title
|
Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action |
Classification
|
OXIDOREDUCTASE/INHIBITOR |
Compound
|
Cytochrome b-c1 complex subunit 1, mitochondrial |
Source
|
ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); |
|
Sequence
|
E: |
KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAG
AKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVK
WQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDP
QWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGR
IRKGPAPLNLEIPAYEFDGDKVIVG
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
E |
residue |
57 |
type |
|
sequence |
Y
|
description |
binding site for residue UMQ A 501
|
source |
: AC1
|
|
2)
|
chain |
E |
residue |
68 |
type |
|
sequence |
S
|
description |
binding site for residue UMQ A 501
|
source |
: AC1
|
|
3)
|
chain |
E |
residue |
67 |
type |
|
sequence |
S
|
description |
binding site for residue 3PH A 502
|
source |
: AC2
|
|
4)
|
chain |
E |
residue |
181 |
type |
|
sequence |
H
|
description |
binding site for residue AOQ C 4003
|
source |
: AC5
|
|
5)
|
chain |
E |
residue |
159 |
type |
|
sequence |
C
|
description |
binding site for residue FES E 301
|
source |
: AD1
|
|
6)
|
chain |
E |
residue |
161 |
type |
|
sequence |
H
|
description |
binding site for residue FES E 301
|
source |
: AD1
|
|
7)
|
chain |
E |
residue |
162 |
type |
|
sequence |
L
|
description |
binding site for residue FES E 301
|
source |
: AD1
|
|
8)
|
chain |
E |
residue |
178 |
type |
|
sequence |
C
|
description |
binding site for residue FES E 301
|
source |
: AD1
|
|
9)
|
chain |
E |
residue |
180 |
type |
|
sequence |
C
|
description |
binding site for residue FES E 301
|
source |
: AD1
|
|
10)
|
chain |
E |
residue |
181 |
type |
|
sequence |
H
|
description |
binding site for residue FES E 301
|
source |
: AD1
|
|
11)
|
chain |
E |
residue |
183 |
type |
|
sequence |
S
|
description |
binding site for residue FES E 301
|
source |
: AD1
|
|
12)
|
chain |
E |
residue |
70 |
type |
|
sequence |
G
|
description |
binding site for residue 3PH E 302
|
source |
: AD2
|
|
13)
|
chain |
E |
residue |
71 |
type |
|
sequence |
A
|
description |
binding site for residue 3PH E 302
|
source |
: AD2
|
|
14)
|
chain |
E |
residue |
73 |
type |
|
sequence |
S
|
description |
binding site for residue 3PH E 302
|
source |
: AD2
|
|
15)
|
chain |
E |
residue |
74 |
type |
|
sequence |
T
|
description |
binding site for residue 3PH E 302
|
source |
: AD2
|
|
16)
|
chain |
E |
residue |
77 |
type |
|
sequence |
T
|
description |
binding site for residue 3PH E 302
|
source |
: AD2
|
|
17)
|
chain |
E |
residue |
178 |
type |
BINDING |
sequence |
C
|
description |
BINDING => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KB9, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:1P84, ECO:0007744|PDB:2IBZ, ECO:0007744|PDB:3CX5, ECO:0007744|PDB:3CXH, ECO:0007744|PDB:4PD4
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
18)
|
chain |
E |
residue |
181 |
type |
BINDING |
sequence |
H
|
description |
BINDING => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KB9, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:1P84, ECO:0007744|PDB:2IBZ, ECO:0007744|PDB:3CX5, ECO:0007744|PDB:3CXH, ECO:0007744|PDB:4PD4
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
19)
|
chain |
E |
residue |
159 |
type |
BINDING |
sequence |
C
|
description |
BINDING => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KB9, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:1P84, ECO:0007744|PDB:2IBZ, ECO:0007744|PDB:3CX5, ECO:0007744|PDB:3CXH, ECO:0007744|PDB:4PD4
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
20)
|
chain |
E |
residue |
161 |
type |
BINDING |
sequence |
H
|
description |
BINDING => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KB9, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:1P84, ECO:0007744|PDB:2IBZ, ECO:0007744|PDB:3CX5, ECO:0007744|PDB:3CXH, ECO:0007744|PDB:4PD4
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
21)
|
chain |
E |
residue |
181 |
type |
catalytic |
sequence |
H
|
description |
208
|
source |
MCSA : MCSA1
|
|
|
|