eF-site ID 4pd4-D
PDB Code 4pd4
Chain D

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Title Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action
Classification OXIDOREDUCTASE/INHIBITOR
Compound Cytochrome b-c1 complex subunit 1, mitochondrial
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c);
Sequence D:  MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVC
AACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQ
GNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIV
KARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGG
SIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEP
EHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFV
FNPPKPRK
Description


Functional site

1) chain D
residue 100
type
sequence V
description binding site for residue HEM D 401
source : AC9

2) chain D
residue 101
type
sequence C
description binding site for residue HEM D 401
source : AC9

3) chain D
residue 104
type
sequence C
description binding site for residue HEM D 401
source : AC9

4) chain D
residue 105
type
sequence H
description binding site for residue HEM D 401
source : AC9

5) chain D
residue 169
type
sequence N
description binding site for residue HEM D 401
source : AC9

6) chain D
residue 172
type
sequence A
description binding site for residue HEM D 401
source : AC9

7) chain D
residue 175
type
sequence P
description binding site for residue HEM D 401
source : AC9

8) chain D
residue 180
type
sequence I
description binding site for residue HEM D 401
source : AC9

9) chain D
residue 184
type
sequence R
description binding site for residue HEM D 401
source : AC9

10) chain D
residue 190
type
sequence Y
description binding site for residue HEM D 401
source : AC9

11) chain D
residue 191
type
sequence I
description binding site for residue HEM D 401
source : AC9

12) chain D
residue 195
type
sequence L
description binding site for residue HEM D 401
source : AC9

13) chain D
residue 218
type
sequence F
description binding site for residue HEM D 401
source : AC9

14) chain D
residue 225
type
sequence M
description binding site for residue HEM D 401
source : AC9

15) chain D
residue 228
type
sequence V
description binding site for residue HEM D 401
source : AC9

16) chain D
residue 251
type
sequence V
description binding site for residue HEM D 401
source : AC9

17) chain D
residue 269
type
sequence L
description binding site for residue 3PH E 302
source : AD2

18) chain D
residue 272
type
sequence K
description binding site for residue 3PH E 302
source : AD2

19) chain D
residue 273
type
sequence T
description binding site for residue 3PH E 302
source : AD2

20) chain D
residue 276
type
sequence I
description binding site for residue 3PH E 302
source : AD2

21) chain D
residue 105
type BINDING
sequence H
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI5

22) chain D
residue 225
type BINDING
sequence M
description axial binding residue => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI6


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