eF-site ID 4oqd-D
PDB Code 4oqd
Chain D

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Title Crystal structure of the tylM1 N,N-dimethyltransferase in complex with SAH and TDP-Qui3NMe2
Classification TRANSFERASE
Compound dTDP-3-amino-3,6-dideoxy-alpha-D-glucopyranose N,N-dimethyltransferase
Source Streptomyces fradiae (Streptomyces roseoflavus) (TYLM1_STRFR)
Sequence D:  PQADYSGEIAELYDLVHQGKGKDYHREAADLAALVRRHSP
KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIAR
RRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAE
LDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVE
AGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHEES
HRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPG
Description


Functional site

1) chain D
residue 14
type
sequence Y
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

2) chain D
residue 22
type
sequence Y
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

3) chain D
residue 33
type
sequence Y
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

4) chain D
residue 58
type
sequence A
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

5) chain D
residue 59
type
sequence C
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

6) chain D
residue 60
type
sequence G
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

7) chain D
residue 64
type
sequence H
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

8) chain D
residue 79
type
sequence E
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

9) chain D
residue 80
type
sequence L
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

10) chain D
residue 81
type
sequence S
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

11) chain D
residue 84
type
sequence M
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

12) chain D
residue 100
type
sequence G
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

13) chain D
residue 101
type
sequence D
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

14) chain D
residue 102
type
sequence M
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

15) chain D
residue 117
type
sequence M
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

16) chain D
residue 118
type
sequence F
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

17) chain D
residue 120
type
sequence S
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

18) chain D
residue 123
type
sequence H
description BINDING SITE FOR RESIDUE SAH D 300
source : AC7

19) chain D
residue 14
type
sequence Y
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

20) chain D
residue 26
type
sequence H
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

21) chain D
residue 29
type
sequence K
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

22) chain D
residue 118
type
sequence F
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

23) chain D
residue 152
type
sequence W
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

24) chain D
residue 153
type
sequence W
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

25) chain D
residue 157
type
sequence N
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

26) chain D
residue 158
type
sequence F
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

27) chain D
residue 159
type
sequence T
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

28) chain D
residue 162
type
sequence Y
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

29) chain D
residue 177
type
sequence R
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

30) chain D
residue 179
type
sequence S
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

31) chain D
residue 181
type
sequence S
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

32) chain D
residue 190
type
sequence I
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

33) chain D
residue 210
type
sequence H
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

34) chain D
residue 241
type
sequence R
description BINDING SITE FOR RESIDUE QDM D 301
source : AC8

35) chain D
residue 14
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21142177
source Swiss-Prot : SWS_FT_FI1

36) chain D
residue 22
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21142177
source Swiss-Prot : SWS_FT_FI1

37) chain D
residue 33
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21142177
source Swiss-Prot : SWS_FT_FI1

38) chain D
residue 58
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:21142177
source Swiss-Prot : SWS_FT_FI1

39) chain D
residue 79
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:21142177
source Swiss-Prot : SWS_FT_FI1

40) chain D
residue 117
type BINDING
sequence M
description BINDING => ECO:0000269|PubMed:21142177
source Swiss-Prot : SWS_FT_FI1

41) chain D
residue 101
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2


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