eF-site ID 4opx-C
PDB Code 4opx
Chain C

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Title Structure of Human PARP-1 bound to a DNA double strand break in complex with (2R)-5-fluoro-2-methyl-2,3-dihydro-1-benzofuran-7-carboxamide
Classification TRANSFERASE/DNA/TRANSFERASE INHIBITOR
Compound Poly [ADP-ribose] polymerase 1
Source Homo sapiens (Human) (4OPX)
Sequence C:  AAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYY
KLQLLWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLY
EEKTGNAWHSKNFTKYPKKFYPLEIDKSKLPKPVQDLIKM
IFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSE
VQQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNA
DSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYE
KLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVID
IFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQ
GLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDP
IGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTT
PDPSANISLDGVDVPLGTGISSGVNDTSLLYNEYIVYDIA
QVNLKYLLKLKFNFKT
Description


Functional site

1) chain C
residue 862
type
sequence H
description BINDING SITE FOR RESIDUE 2UR C 1101
source : AC3

2) chain C
residue 863
type
sequence G
description BINDING SITE FOR RESIDUE 2UR C 1101
source : AC3

3) chain C
residue 896
type
sequence Y
description BINDING SITE FOR RESIDUE 2UR C 1101
source : AC3

4) chain C
residue 897
type
sequence F
description BINDING SITE FOR RESIDUE 2UR C 1101
source : AC3

5) chain C
residue 898
type
sequence A
description BINDING SITE FOR RESIDUE 2UR C 1101
source : AC3

6) chain C
residue 903
type
sequence K
description BINDING SITE FOR RESIDUE 2UR C 1101
source : AC3

7) chain C
residue 904
type
sequence S
description BINDING SITE FOR RESIDUE 2UR C 1101
source : AC3

8) chain C
residue 907
type
sequence Y
description BINDING SITE FOR RESIDUE 2UR C 1101
source : AC3

9) chain C
residue 748
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI11

10) chain C
residue 988
type ACT_SITE
sequence E
description For poly [ADP-ribose] polymerase activity => ECO:0000305|PubMed:32028527, ECO:0000305|PubMed:7852410, ECO:0000305|PubMed:9315851
source Swiss-Prot : SWS_FT_FI1

11) chain C
residue 862
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

12) chain C
residue 871
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

13) chain C
residue 878
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

14) chain C
residue 904
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

15) chain C
residue 782
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI8

16) chain C
residue 786
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI9

17) chain C
residue 594
type MOD_RES
sequence T
description Phosphothreonine; by PRKDC => ECO:0000269|PubMed:35460603
source Swiss-Prot : SWS_FT_FI6

18) chain C
residue 600
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI7

19) chain C
residue 621
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI7


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