eF-site ID 4omd-A
PDB Code 4omd
Chain A

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Title X-ray structure of human furin in complex with the competitive inhibitor Phac-RVR-Amba
Classification HYDROLASE/HYDROLASE INHIBITOR
Compound Furin
Source Homo sapiens (Human) (4OMD)
Sequence A:  VYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIV
VSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQ
MNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLD
GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPAR
LAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGY
TNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNE
KQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNL
TWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGL
LDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVR
KTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSP
MGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWV
LEIENTSEANNYGTLTKFTLVLYGTA
Description (1)  Furin (E.C.3.4.21.75), phenylacetyl-Arg-Val-Arg-(amidomethyl)benzamidine


Functional site

1) chain A
residue 313
type
sequence Y
description BINDING SITE FOR RESIDUE FMT A 601
source : AC1

2) chain A
residue 447
type
sequence Q
description BINDING SITE FOR RESIDUE FMT A 601
source : AC1

3) chain A
residue 275
type
sequence F
description BINDING SITE FOR RESIDUE FMT A 602
source : AC2

4) chain A
residue 313
type
sequence Y
description BINDING SITE FOR RESIDUE FMT A 602
source : AC2

5) chain A
residue 449
type
sequence K
description BINDING SITE FOR RESIDUE FMT A 602
source : AC2

6) chain A
residue 571
type
sequence Y
description BINDING SITE FOR RESIDUE FMT A 602
source : AC2

7) chain A
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE CA A 603
source : AC3

8) chain A
residue 162
type
sequence D
description BINDING SITE FOR RESIDUE CA A 603
source : AC3

9) chain A
residue 205
type
sequence V
description BINDING SITE FOR RESIDUE CA A 603
source : AC3

10) chain A
residue 208
type
sequence N
description BINDING SITE FOR RESIDUE CA A 603
source : AC3

11) chain A
residue 210
type
sequence V
description BINDING SITE FOR RESIDUE CA A 603
source : AC3

12) chain A
residue 212
type
sequence G
description BINDING SITE FOR RESIDUE CA A 603
source : AC3

13) chain A
residue 258
type
sequence D
description BINDING SITE FOR RESIDUE CA A 604
source : AC4

14) chain A
residue 301
type
sequence D
description BINDING SITE FOR RESIDUE CA A 604
source : AC4

15) chain A
residue 331
type
sequence E
description BINDING SITE FOR RESIDUE CA A 604
source : AC4

16) chain A
residue 174
type
sequence D
description BINDING SITE FOR RESIDUE CA A 605
source : AC5

17) chain A
residue 179
type
sequence D
description BINDING SITE FOR RESIDUE CA A 605
source : AC5

18) chain A
residue 181
type
sequence D
description BINDING SITE FOR RESIDUE CA A 605
source : AC5

19) chain A
residue 309
type
sequence T
description BINDING SITE FOR RESIDUE NA A 606
source : AC6

20) chain A
residue 311
type
sequence S
description BINDING SITE FOR RESIDUE NA A 606
source : AC6

21) chain A
residue 314
type
sequence T
description BINDING SITE FOR RESIDUE NA A 606
source : AC6

22) chain A
residue 276
type
sequence R
description BINDING SITE FOR RESIDUE FMT B 601
source : AC7

23) chain A
residue 280
type
sequence Q
description BINDING SITE FOR RESIDUE FMT B 601
source : AC7

24) chain A
residue 276
type
sequence R
description BINDING SITE FOR RESIDUE FMT B 602
source : AC8

25) chain A
residue 154
type
sequence D
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

26) chain A
residue 191
type
sequence D
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

27) chain A
residue 192
type
sequence N
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

28) chain A
residue 194
type
sequence H
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

29) chain A
residue 231
type
sequence V
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

30) chain A
residue 236
type
sequence E
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

31) chain A
residue 253
type
sequence S
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

32) chain A
residue 254
type
sequence W
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

33) chain A
residue 255
type
sequence G
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

34) chain A
residue 256
type
sequence P
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

35) chain A
residue 258
type
sequence D
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

36) chain A
residue 264
type
sequence D
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

37) chain A
residue 265
type
sequence G
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

38) chain A
residue 292
type
sequence A
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

39) chain A
residue 293
type
sequence S
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

40) chain A
residue 295
type
sequence N
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

41) chain A
residue 306
type
sequence D
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

42) chain A
residue 308
type
sequence Y
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

43) chain A
residue 367
type
sequence T
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

44) chain A
residue 368
type
sequence S
description BINDING SITE FOR CHAIN H OF PHENYLACETYL-ARG-VAL-ARG-(AMIDOMETHYL)BENZAMIDINE
source : EC1

45) chain A
residue 153
type ACT_SITE
sequence D
description Charge relay system => ECO:0000255|PROSITE-ProRule:PRU01240
source Swiss-Prot : SWS_FT_FI1

46) chain A
residue 194
type ACT_SITE
sequence H
description Charge relay system => ECO:0000255|PROSITE-ProRule:PRU01240
source Swiss-Prot : SWS_FT_FI1

47) chain A
residue 368
type ACT_SITE
sequence S
description Charge relay system => ECO:0000255|PROSITE-ProRule:PRU01240
source Swiss-Prot : SWS_FT_FI1

48) chain A
residue 115
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

49) chain A
residue 258
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

50) chain A
residue 301
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

51) chain A
residue 331
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

52) chain A
residue 162
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

53) chain A
residue 174
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

54) chain A
residue 179
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

55) chain A
residue 181
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

56) chain A
residue 205
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

57) chain A
residue 208
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

58) chain A
residue 210
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

59) chain A
residue 212
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:24666235, ECO:0000269|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI2

60) chain A
residue 154
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

61) chain A
residue 191
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

62) chain A
residue 236
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

63) chain A
residue 253
type BINDING
sequence S
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

64) chain A
residue 264
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

65) chain A
residue 292
type BINDING
sequence A
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

66) chain A
residue 306
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

67) chain A
residue 308
type BINDING
sequence Y
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

68) chain A
residue 368
type BINDING
sequence S
description BINDING => ECO:0000305|PubMed:24666235, ECO:0000305|PubMed:25974265, ECO:0007744|PDB:4OMC, ECO:0007744|PDB:4OMD, ECO:0007744|PDB:4RYD
source Swiss-Prot : SWS_FT_FI3

69) chain A
residue 387
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4

70) chain A
residue 440
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4

71) chain A
residue 553
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4

72) chain A
residue 149-160
type prosite
sequence VSILDDGIEKNH
description SUBTILASE_ASP Serine proteases, subtilase family, aspartic acid active site. VSILDDGIeknH
source prosite : PS00136

73) chain A
residue 194-204
type prosite
sequence HGTRCAGEVAA
description SUBTILASE_HIS Serine proteases, subtilase family, histidine active site. HGTrCAGeVAA
source prosite : PS00137

74) chain A
residue 366-376
type prosite
sequence GTSASAPLAAG
description SUBTILASE_SER Serine proteases, subtilase family, serine active site. GTSaSaPlAAG
source prosite : PS00138


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