|
eF-site ID
|
4oir-B |
PDB Code
|
4oir |
Chain
|
B |
|
click to enlarge
|
|
Title
|
Crystal structure of Thermus thermophilus RNA polymerase transcription initiation complex soaked with GE23077 and rifamycin SV |
Classification
|
TRANSCRIPTION, TRANSFERASE/ANTIBIOTIC |
Compound
|
DNA-directed RNA polymerase subunit alpha |
Source
|
ORGANISM_SCIENTIFIC: Thermus thermophilus; |
|
Sequence
|
B: |
LDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLR
RILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILN
LKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVE
IMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDR
INAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWT
DGSVTPLEALNQAVEILREHLTYFSNP
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
B |
residue |
154 |
type |
|
sequence |
E
|
description |
BINDING SITE FOR RESIDUE MG B 401
|
source |
: AC1
|
|
2)
|
chain |
B |
residue |
168 |
type |
|
sequence |
D
|
description |
BINDING SITE FOR RESIDUE MG B 401
|
source |
: AC1
|
|
3)
|
chain |
B |
residue |
8 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR GE23077
|
source |
: AC8
|
|
4)
|
chain |
B |
residue |
9 |
type |
|
sequence |
P
|
description |
BINDING SITE FOR GE23077
|
source |
: AC8
|
|
5)
|
chain |
B |
residue |
29 |
type |
|
sequence |
E
|
description |
BINDING SITE FOR GE23077
|
source |
: AC8
|
|
6)
|
chain |
B |
residue |
189 |
type |
|
sequence |
R
|
description |
BINDING SITE FOR GE23077
|
source |
: AC8
|
|
|
|