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eF-site ID
|
4oio-F |
PDB Code
|
4oio |
Chain
|
F |
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click to enlarge
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Title
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Crystal structure of Thermus thermophilus pre-insertion substrate complex for de novo transcription initiation |
Classification
|
TRANSCRIPTION, TRANSFERASE |
Compound
|
DNA-directed RNA polymerase subunit alpha |
Source
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ORGANISM_SCIENTIFIC: Thermus thermophilus; |
|
Sequence
|
F: |
SDPVRQYLHEIGQVPLLTLEEEVELARKVEEGMEAIKKLS
EITGLDPDLIREVVRAKILGSARVRHIPGLKETLDPKTVE
EIDQKLKSLPKEHKRYLHIAREGEAARQHLIEANLRLVVS
IAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFST
YATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTARQ
LQQELGREPTYEEIAEAMGPGWDAKRVEETLKIAQEPVSL
ETPIGDEKDSFYGDFIPDEHLPSPVDAATQSLLSEELEKA
LSKLSEREAMVLKLRKGLIDGREHTLEEVGAFFGVTRERI
RQIENKALRKLKYHESRTRKLRDF
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Description
|
|
Functional site
|
|
1)
|
chain |
F |
residue |
382-408 |
type |
prosite |
sequence |
TLEEVGAFFGVTRERIRQIENKALRKL
|
description |
SIGMA70_2 Sigma-70 factors family signature 2. TleEVGaffgVTrerIrQIEnkaLrkL
|
source |
prosite : PS00716
|
|
2)
|
chain |
F |
residue |
187-194 |
type |
prosite |
sequence |
LIEANLRL
|
description |
CPSASE_2 Carbamoyl-phosphate synthase subdomain signature 2. LIEANLRL
|
source |
prosite : PS00867
|
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