eF-site ID 4nql-A
PDB Code 4nql
Chain A

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Title The crystal structure of the DUB domain of AMSH orthologue, Sst2 from S. pombe, in complex with lysine 63-linked diubiquitin
Classification HYDROLASE/PROTEIN BINDING
Compound AMSH-like protease sst2
Source Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (UBC_MOUSE)
Sequence A:  FKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLAT
CGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFE
FQDKHNLLTLGWIHTHPTQTCFMSSVALHTHCSYQLMLPE
AIAIVMAPSKNTSGIFRLLDPEGLQTIVKCRKPGLFHPHE
GKVYTMVAQPGHVREINSKLQVVDLRV
Description


Functional site

1) chain A
residue 356
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

2) chain A
residue 397
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

3) chain A
residue 404
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

4) chain A
residue 406
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

5) chain A
residue 325
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 502
source : AC2

6) chain A
residue 329
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 502
source : AC2

7) chain A
residue 336
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 502
source : AC2

8) chain A
residue 361
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 502
source : AC2

9) chain A
residue 284
type
sequence N
description BINDING SITE FOR RESIDUE EDO A 503
source : AC3

10) chain A
residue 314
type
sequence S
description BINDING SITE FOR RESIDUE EDO A 503
source : AC3

11) chain A
residue 315
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 503
source : AC3

12) chain A
residue 345
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 503
source : AC3

13) chain A
residue 316
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 504
source : AC4

14) chain A
residue 317
type
sequence C
description BINDING SITE FOR RESIDUE EDO A 504
source : AC4

15) chain A
residue 318
type
sequence G
description BINDING SITE FOR RESIDUE EDO A 504
source : AC4

16) chain A
residue 381
type
sequence G
description BINDING SITE FOR RESIDUE EDO A 505
source : AC5

17) chain A
residue 382
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 505
source : AC5

18) chain A
residue 413
type
sequence M
description BINDING SITE FOR RESIDUE EDO A 505
source : AC5

19) chain A
residue 414
type
sequence V
description BINDING SITE FOR RESIDUE EDO A 505
source : AC5

20) chain A
residue 416
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 505
source : AC5

21) chain A
residue 258
type
sequence K
description BINDING SITE FOR RESIDUE EDO A 506
source : AC6

22) chain A
residue 362
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 506
source : AC6

23) chain A
residue 366
type
sequence P
description BINDING SITE FOR RESIDUE EDO A 506
source : AC6

24) chain A
residue 387
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 506
source : AC6

25) chain A
residue 349
type
sequence F
description BINDING SITE FOR RESIDUE EDO C 101
source : AC8

26) chain A
residue 354
type SITE
sequence A
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

27) chain A
residue 397
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

28) chain A
residue 404
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

29) chain A
residue 406
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2


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