|
eF-site ID
|
4nqk-A |
PDB Code
|
4nqk |
Chain
|
A |
|
click to enlarge
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Title
|
Structure of an Ubiquitin complex |
Classification
|
Hydrolase/Apoptosis |
Compound
|
Probable ATP-dependent RNA helicase DDX58 |
Source
|
Homo sapiens (Human) (UBC_HUMAN) |
|
Sequence
|
A: |
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQY
IQAEKNNKGPMEAATLFLKFLLELQEEGWFRGFLDALDHA
GYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLL
RSDKENWPKTLKLALEKERNKFSELWIV
|
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Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
96 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
2)
|
chain |
A |
residue |
172 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:19484123, ECO:0000269|PubMed:24755855, ECO:0000269|PubMed:28469175
|
source |
Swiss-Prot : SWS_FT_FI5
|
|
3)
|
chain |
A |
residue |
181 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:26471729
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
4)
|
chain |
A |
residue |
154 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:19484123, ECO:0000269|PubMed:24755855
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
5)
|
chain |
A |
residue |
164 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:19484123, ECO:0000269|PubMed:24755855
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
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