eF-site ID 4ncj-A PDB Code 4ncj Chain A click to enlarge Title Crystal Structure of Pyrococcus furiosis Rad50 R805E mutation with ADP Beryllium Flouride Classification DNA BINDING PROTEIN Compound DNA double-strand break repair Rad50 ATPase Source Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (RAD50_PYRFU) Sequence A:  MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLL DAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGT KYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAIS AFMEKLIPYNIFLNAIYIRQGQIDAILESDEAREKVVREV LNLKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRA EENKVRLFVVWEGKERPLTFLSGGERIALGLAFELAMSLY LAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVI LVSHDEELKDAADHVIRISLENGSSKVEVVS Description Functional site 1) chain A residue 12 type sequence R description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 2) chain A residue 13 type sequence S description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 3) chain A residue 33 type sequence G description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 4) chain A residue 34 type sequence S description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 5) chain A residue 35 type sequence G description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 6) chain A residue 36 type sequence K description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 7) chain A residue 37 type sequence S description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 8) chain A residue 38 type sequence S description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 9) chain A residue 60 type sequence E description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 10) chain A residue 62 type sequence T description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 11) chain A residue 63 type sequence K description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 12) chain A residue 64 type sequence V description BINDING SITE FOR RESIDUE ADP A 901 source : AC1 13) chain A residue 32 type sequence N description BINDING SITE FOR RESIDUE BEF A 902 source : AC2 14) chain A residue 33 type sequence G description BINDING SITE FOR RESIDUE BEF A 902 source : AC2 15) chain A residue 36 type sequence K description BINDING SITE FOR RESIDUE BEF A 902 source : AC2 16) chain A residue 140 type sequence Q description BINDING SITE FOR RESIDUE BEF A 902 source : AC2 17) chain A residue 37 type sequence S description BINDING SITE FOR RESIDUE MG A 903 source : AC3 18) chain A residue 140 type sequence Q description BINDING SITE FOR RESIDUE MG A 903 source : AC3 19) chain A residue 763 type sequence K description BINDING SITE FOR RESIDUE ADP C 901 source : AC7 20) chain A residue 764 type sequence Y description BINDING SITE FOR RESIDUE ADP C 901 source : AC7 21) chain A residue 791 type sequence F description BINDING SITE FOR RESIDUE ADP C 901 source : AC7 22) chain A residue 793 type sequence S description BINDING SITE FOR RESIDUE ADP C 901 source : AC7 23) chain A residue 796 type sequence E description BINDING SITE FOR RESIDUE ADP C 901 source : AC7 24) chain A residue 793 type sequence S description BINDING SITE FOR RESIDUE BEF C 902 source : AC8 25) chain A residue 794 type sequence G description BINDING SITE FOR RESIDUE BEF C 902 source : AC8 26) chain A residue 795 type sequence G description BINDING SITE FOR RESIDUE BEF C 902 source : AC8 27) chain A residue 763 type BINDING sequence K description BINDING => ECO:0000269|PubMed:10892749, ECO:0000269|PubMed:21441914, ECO:0007744|PDB:1F2U, ECO:0007744|PDB:3QKT source Swiss-Prot : SWS_FT_FI3 28) chain A residue 791 type BINDING sequence F description BINDING => ECO:0000269|PubMed:10892749, ECO:0000269|PubMed:21441914, ECO:0007744|PDB:1F2U, ECO:0007744|PDB:3QKT source Swiss-Prot : SWS_FT_FI3 29) chain A residue 12 type BINDING sequence R description BINDING => ECO:0000269|PubMed:10892749, ECO:0000269|PubMed:21441914, ECO:0000269|PubMed:24493214, ECO:0007744|PDB:1F2U, ECO:0007744|PDB:3QKT, ECO:0007744|PDB:3QKU, ECO:0007744|PDB:4NCJ source Swiss-Prot : SWS_FT_FI1 30) chain A residue 32 type BINDING sequence N description BINDING => ECO:0000269|PubMed:10892749, ECO:0000269|PubMed:21441914, ECO:0000269|PubMed:24493214, ECO:0007744|PDB:1F2U, ECO:0007744|PDB:3QKT, ECO:0007744|PDB:3QKU, ECO:0007744|PDB:4NCJ source Swiss-Prot : SWS_FT_FI1 31) chain A residue 60 type BINDING sequence E description BINDING => ECO:0000269|PubMed:10892749, ECO:0000269|PubMed:21441914, ECO:0000269|PubMed:24493214, ECO:0007744|PDB:1F2U, ECO:0007744|PDB:3QKT, ECO:0007744|PDB:3QKU, ECO:0007744|PDB:4NCJ source Swiss-Prot : SWS_FT_FI1 32) chain A residue 140 type BINDING sequence Q description BINDING => ECO:0000269|PubMed:10892749, ECO:0000269|PubMed:21441914, ECO:0007744|PDB:1F2U, ECO:0007744|PDB:3QKT, ECO:0007744|PDB:3QKU source Swiss-Prot : SWS_FT_FI2

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