eF-site ID 4ncb-CDEFHP
PDB Code 4ncb
Chain C, D, E, F, H, P

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Title Structure of Thermus thermophilus Argonaute bound to guide DNA and 19-mer target DNA with Mg2+
Classification NUCLEAR PROTEIN/DNA
Compound Argonaute
Source Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (4NCB)
Sequence C:  TGAGGTAGTAGGTTGT
D:  CAACCTACTACCTCG
E:  TGAGGTAGTAGGTTGTA
F:  TACTACCTCG
H:  ACAACC
P:  CAACC
Description


Functional site

1) chain D
residue 10
type
sequence T
description BINDING SITE FOR RESIDUE MG A 702
source : AC2

2) chain F
residue 10
type
sequence T
description BINDING SITE FOR RESIDUE MG B 702
source : AC4

3) chain F
residue 10
type
sequence T
description BINDING SITE FOR RESIDUE MG B 703
source : AC5

4) chain H
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE MG B 703
source : AC5

5) chain C
residue 1
type
sequence T
description BINDING SITE FOR RESIDUE MG C 101
source : AC6

6) chain C
residue 3
type
sequence A
description BINDING SITE FOR RESIDUE MG C 101
source : AC6

7) chain D
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE MG D 101
source : AC7

8) chain D
residue 10
type
sequence T
description BINDING SITE FOR RESIDUE MG D 101
source : AC7

9) chain P
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE MG D 101
source : AC7

10) chain E
residue 1
type
sequence T
description BINDING SITE FOR RESIDUE MG E 101
source : AC8

11) chain E
residue 3
type
sequence A
description BINDING SITE FOR RESIDUE MG E 101
source : AC8


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