eF-site ID 4nbi-A
PDB Code 4nbi
Chain A

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Title D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with D-tyrosyl-3'-aminoadenosine at 1.86 Angstrom resolution
Classification HYDROLASE
Compound D-tyrosyl-tRNA(Tyr) deacylase
Source Plasmodium falciparum (isolate 3D7) (Q8IIS0_PLAF7)
Sequence A:  MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICF
LGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLN
YELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKII
DEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI
NLN
Description


Functional site

1) chain A
residue 41
type
sequence L
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

2) chain A
residue 43
type
sequence I
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

3) chain A
residue 87
type
sequence S
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

4) chain A
residue 88
type
sequence Q
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

5) chain A
residue 89
type
sequence F
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

6) chain A
residue 107
type
sequence K
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

7) chain A
residue 112
type
sequence A
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

8) chain A
residue 137
type
sequence F
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

9) chain A
residue 138
type
sequence G
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

10) chain A
residue 139
type
sequence N
description BINDING SITE FOR RESIDUE D3Y A 201
source : AC1

11) chain A
residue 144
type
sequence D
description BINDING SITE FOR RESIDUE PGE A 502
source : AC2

12) chain A
residue 146
type
sequence T
description BINDING SITE FOR RESIDUE PGE A 502
source : AC2

13) chain A
residue 149
type
sequence G
description BINDING SITE FOR RESIDUE D3Y B 201
source : AC3

14) chain A
residue 150
type
sequence P
description BINDING SITE FOR RESIDUE D3Y B 201
source : AC3

15) chain A
residue 90
type ACT_SITE
sequence T
description Nucleophile => ECO:0000305|PubMed:20007323
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 72
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 89
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI3


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