eF-site ID 4n4r-ABCD PDB Code 4n4r Chain A, B, C, D click to enlarge Title Structure basis of lipopolysaccharide biogenesis Classification MEMBRANE PROTEIN Compound LPS-assembly protein LptD Source Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (LPTE_SALTY) Sequence A:  SGFLIPNAKYTTKNYFEFYLPYYWNIAPNXDATITPHYXH RRGNIXWENEFRYLTQAGEGVXELDYLKHRWLFYWQHSGV XDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYH NDLGPFDTRIYGQAVHFVNTKDNXPEATRVHLEPTINLPL SNRWGSLNTEAKLXATHYQQTNLDSYNSDPNNKNKLEDSV NRVXPQFKVDGKLIFERDXAXLAPGYTQTLEPRVQYLYVP YRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQV TTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWE NDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATS SSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQY KNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQXLG LQYNCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNITQEX LRSNILPYQSSX B:  CGWHLRSTTQVPASXKTXILDSGDPNGPLSRAVRNQLRLN NVNLLDKDTTRKDVPSLRLGTVTILQDTASVFQDGQTAEY QXVXTVNASVLIPGHDIYPISTKVYRSFFDNPQXALAKDN EQAXIVQEXYDKAAEQLIRKLTSVRAADIQA C:  SGFLIPNAKYTTKNYFEFYLPYYWNIAPNXDATITPHYXH RRGNIXWENEFRYLTQAGEGVXELDYLPSDKHRWLFYWQH SGVXDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQ KFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVN YYHNDLGPFDTRIYGQAVHFVNTKDNXPEATRVHLEPTIN LPLSNRWGSLNTEAKLXATHYQQTNLDSYNSDPNNKNKLE DSVNRVXPQFKVDGKLIFERDXAXLAPGYTQTLEPRVQYL YVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASA NQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNI KWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSV ATSSSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTA EQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQ XLGLQYNAIRVGYERKLNGWDNDKQHAIYDNAIGFNITQE XLRSNILPYQSSX D:  CGWHLRSTTQVPASXKTXILDSGDPNGPLSRAVRNQLRLN NVNLLDKDTTRKDVPSLRLGTVTILQDTASVFQDGQTAEY QXVXTVNASVLIPGHDIYPISTKVYRSFFDNPQXALAKDN EQAXIVQEXYDKAAEQLIRKLTSVRAADIQA Description (1)  LPS-assembly protein LptD, LPS-assembly lipoprotein LptE Functional site 1) chain A residue 330 type sequence D description BINDING SITE FOR RESIDUE CAC A 801 source : AC1 2) chain A residue 356 type sequence T description BINDING SITE FOR RESIDUE CAC A 801 source : AC1 3) chain A residue 496 type sequence E description BINDING SITE FOR RESIDUE ZN A 802 source : AC2 4) chain A residue 498 type sequence D description BINDING SITE FOR RESIDUE ZN A 802 source : AC2 5) chain B residue 22 type sequence H description BINDING SITE FOR RESIDUE ZN A 802 source : AC2 6) chain C residue 330 type sequence D description BINDING SITE FOR RESIDUE CAC C 801 source : AC3 7) chain C residue 356 type sequence T description BINDING SITE FOR RESIDUE CAC C 801 source : AC3 8) chain C residue 496 type sequence E description BINDING SITE FOR RESIDUE ZN C 802 source : AC4 9) chain C residue 498 type sequence D description BINDING SITE FOR RESIDUE ZN C 802 source : AC4 10) chain D residue 22 type sequence H description BINDING SITE FOR RESIDUE ZN C 802 source : AC4 11) chain B residue 19 type LIPID sequence C description S-diacylglycerol cysteine => ECO:0000255|HAMAP-Rule:MF_01186 source Swiss-Prot : SWS_FT_FI1 12) chain D residue 19 type LIPID sequence C description S-diacylglycerol cysteine => ECO:0000255|HAMAP-Rule:MF_01186 source Swiss-Prot : SWS_FT_FI1

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