eF-site ID 4n48-B
PDB Code 4n48
Chain B

click to enlarge
Title Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 Protein in complex with capped RNA fragment
Classification TRANSFERASE/RNA
Compound Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
Source Homo sapiens (Human) (4N48)
Sequence B:  VDWRDEPEPSACEQVSWFPECTTEIPDTQEMSDWMVVGKR
KMIIEDETEFCGEELLHSVLQCKSVFDVLDGEEMRRARTR
ANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGK
PLVKDRELLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTL
KGPNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPENI
SAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQ
LLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVYLLYC
CFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFA
VNIKLNQLRNTDSDVNLVVPLEVIKGDHEFTDYMIRSNES
HCSLQIKALAKIHAFVQDTTLSEPRQAEIRKECLRLWGIP
DQARV
Description


Functional site

1) chain B
residue 234
type
sequence N
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

2) chain B
residue 236
type
sequence A
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

3) chain B
residue 277
type
sequence C
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

4) chain B
residue 278
type
sequence A
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

5) chain B
residue 279
type
sequence G
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

6) chain B
residue 280
type
sequence P
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

7) chain B
residue 281
type
sequence G
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

8) chain B
residue 282
type
sequence G
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

9) chain B
residue 283
type
sequence F
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

10) chain B
residue 301
type
sequence T
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

11) chain B
residue 302
type
sequence L
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

12) chain B
residue 306
type
sequence N
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

13) chain B
residue 334
type
sequence G
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

14) chain B
residue 335
type
sequence D
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

15) chain B
residue 336
type
sequence I
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

16) chain B
residue 337
type
sequence T
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

17) chain B
residue 364
type
sequence D
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

18) chain B
residue 365
type
sequence G
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

19) chain B
residue 366
type
sequence G
description BINDING SITE FOR RESIDUE SAM B 601
source : AC2

20) chain B
residue 203
type
sequence K
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

21) chain B
residue 204
type
sequence S
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

22) chain B
residue 206
type
sequence F
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

23) chain B
residue 207
type
sequence D
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

24) chain B
residue 214
type
sequence M
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

25) chain B
residue 218
type
sequence R
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

26) chain B
residue 373
type
sequence E
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

27) chain B
residue 374
type
sequence N
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

28) chain B
residue 376
type
sequence Q
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

29) chain B
residue 438
type
sequence A
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

30) chain B
residue 439
type
sequence N
description BINDING SITE FOR RESIDUE MGT G 101
source : AC4

31) chain B
residue 239
type ACT_SITE
sequence K
description ACT_SITE => ECO:0000305|PubMed:21310715
source Swiss-Prot : SWS_FT_FI1

32) chain B
residue 364
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000305|PubMed:21310715
source Swiss-Prot : SWS_FT_FI1

33) chain B
residue 404
type ACT_SITE
sequence K
description Proton acceptor => ECO:0000305|PubMed:21310715
source Swiss-Prot : SWS_FT_FI2

34) chain B
residue 234
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:24402442, ECO:0007744|PDB:4N48, ECO:0007744|PDB:4N49
source Swiss-Prot : SWS_FT_FI3

35) chain B
residue 277
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:24402442, ECO:0007744|PDB:4N48, ECO:0007744|PDB:4N49
source Swiss-Prot : SWS_FT_FI3

36) chain B
residue 335
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:24402442, ECO:0007744|PDB:4N48, ECO:0007744|PDB:4N49
source Swiss-Prot : SWS_FT_FI3

37) chain B
residue 374
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:24402442, ECO:0007744|PDB:4N48, ECO:0007744|PDB:4N49
source Swiss-Prot : SWS_FT_FI3

38) chain B
residue 439
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:24402442, ECO:0007744|PDB:4N48, ECO:0007744|PDB:4N49
source Swiss-Prot : SWS_FT_FI3

39) chain B
residue 203
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:24402442, ECO:0007744|PDB:4N48, ECO:0007744|PDB:4N49
source Swiss-Prot : SWS_FT_FI3

40) chain B
residue 218
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:24402442, ECO:0007744|PDB:4N48, ECO:0007744|PDB:4N49
source Swiss-Prot : SWS_FT_FI3


Display surface

Download
Links