eF-site ID 4msq-A
PDB Code 4msq
Chain A

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Title Crystal structure of Schizosaccharomyces pombe AMSH-like protease sst2 catalytic domain bound to ubiquitin
Classification HYDROLASE/PROTEIN BINDING
Compound AMSH-like protease sst2
Source Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (UBC_HUMAN)
Sequence A:  KIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETC
GILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEF
QDKHNLLTLGWIHTHPTQTCFMSSVDLHTHCSYQLMLPEA
IAIVMAPSKNTSGIFRLLDPEGLQTIVKCRKPGLFHPHEG
KVYTMVAQPGHVREINSKLQVVDLR
Description


Functional site

1) chain A
residue 356
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

2) chain A
residue 397
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

3) chain A
residue 404
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

4) chain A
residue 406
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

5) chain A
residue 341
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

6) chain A
residue 343
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

7) chain A
residue 354
type
sequence D
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

8) chain A
residue 315
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 503
source : AC3

9) chain A
residue 346
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 503
source : AC3

10) chain A
residue 349
type
sequence F
description BINDING SITE FOR RESIDUE EDO A 503
source : AC3

11) chain A
residue 290
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 504
source : AC4

12) chain A
residue 325
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 504
source : AC4

13) chain A
residue 329
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 504
source : AC4

14) chain A
residue 336
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 504
source : AC4

15) chain A
residue 361
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 504
source : AC4

16) chain A
residue 281
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 505
source : AC5

17) chain A
residue 282
type
sequence K
description BINDING SITE FOR RESIDUE EDO A 505
source : AC5

18) chain A
residue 258
type
sequence K
description BINDING SITE FOR RESIDUE EDO A 506
source : AC6

19) chain A
residue 362
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 506
source : AC6

20) chain A
residue 366
type
sequence P
description BINDING SITE FOR RESIDUE EDO A 506
source : AC6

21) chain A
residue 387
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 506
source : AC6

22) chain A
residue 388
type
sequence P
description BINDING SITE FOR RESIDUE EDO A 507
source : AC7

23) chain A
residue 392
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 507
source : AC7

24) chain A
residue 313
type
sequence T
description BINDING SITE FOR RESIDUE EDO C 505
source : BC5

25) chain A
residue 315
type
sequence D
description BINDING SITE FOR RESIDUE EDO C 505
source : BC5

26) chain A
residue 341
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01182
source Swiss-Prot : SWS_FT_FI1

27) chain A
residue 343
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01182
source Swiss-Prot : SWS_FT_FI1

28) chain A
residue 354
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01182
source Swiss-Prot : SWS_FT_FI1

29) chain A
residue 286
type SITE
sequence E
description Indirect zinc-binding => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

30) chain A
residue 356
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

31) chain A
residue 397
type BINDING
sequence C
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

32) chain A
residue 404
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

33) chain A
residue 406
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2


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