eF-site ID 4m4w-D
PDB Code 4m4w
Chain D

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Title Mechanistic implications for the bacterial primosome assembly of the structure of a helicase-helicase loader complex
Classification REPLICATION
Compound Replicative helicase
Source Geobacillus stearothermophilus (Bacillus stearothermophilus) (DNAI_BACSU)
Sequence D:  EAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHA
MLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELAD
AVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTRED
EIDVLLDEADRKIMEITGIPTGFTELDRMTSGFQRSDLII
VAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQL
VMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAG
IYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQE
VSEISRSLKALARELEVPVIALSQLRPMMSDIRESGSIEQ
DADIVAFLYEIIIAKQRNGPVGTVQLAFIKEYNKFVNL
Description (1)  Replicative helicase, DNA primase (E.C.2.7.7.-), Primosomal protein DnaI


Functional site

1) chain D
residue 241
type ACT_SITE
sequence E
description Nucleophile => ECO:0000305|PubMed:12235389, ECO:0000305|PubMed:23022319
source Swiss-Prot : SWS_FT_FI1

2) chain D
residue 213
type BINDING
sequence S
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

3) chain D
residue 215
type BINDING
sequence G
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

4) chain D
residue 216
type BINDING
sequence K
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

5) chain D
residue 217
type BINDING
sequence T
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

6) chain D
residue 218
type BINDING
sequence A
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

7) chain D
residue 250
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

8) chain D
residue 418
type BINDING
sequence K
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

9) chain D
residue 419
type BINDING
sequence Q
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

10) chain D
residue 420
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI2

11) chain D
residue 362
type BINDING
sequence Q
description BINDING => ECO:0000305|PubMed:23022319
source Swiss-Prot : SWS_FT_FI3

12) chain D
residue 381
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI4

13) chain D
residue 382
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI4

14) chain D
residue 384
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV
source Swiss-Prot : SWS_FT_FI4

15) chain D
residue 362
type SITE
sequence Q
description Gamma-phosphate sensor => ECO:0000305|PubMed:12235389
source Swiss-Prot : SWS_FT_FI5


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