eF-site ID 4ljp-AB
PDB Code 4ljp
Chain A, B

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Title Structure of an active ligase (HOIP-H889A)/ubiquitin transfer complex
Classification LIGASE
Compound E3 ubiquitin-protein ligase RNF31
Source ORGANISM_COMMON: bovine,cow,domestic cattle,domestic cow; ORGANISM_SCIENTIFIC: Bos taurus;
Sequence A:  AQGLAMYLQENGIDCPKCKFSYALARGGCMHFACTQCRHQ
FCSGCYNAFYAKNKCPEPNCRVKKSLHGHHPRDCLFYLRD
WTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKE
VPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLD
PATLYEVEELETATERYLHVRPQPLAGEDPPAYQARLLQK
LTEEVPLGQSIPRRR
B:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Description


Functional site

1) chain A
residue 871
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1101
source : AC1

2) chain A
residue 874
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1101
source : AC1

3) chain A
residue 890
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1101
source : AC1

4) chain A
residue 893
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1101
source : AC1

5) chain A
residue 898
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1102
source : AC2

6) chain A
residue 901
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1102
source : AC2

7) chain A
residue 926
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1102
source : AC2

8) chain A
residue 930
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1102
source : AC2

9) chain A
residue 911
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1103
source : AC3

10) chain A
residue 916
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1103
source : AC3

11) chain A
residue 923
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1103
source : AC3

12) chain A
residue 925
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1103
source : AC3

13) chain A
residue 969
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1104
source : AC4

14) chain A
residue 986
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1104
source : AC4

15) chain A
residue 998
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 1104
source : AC4

16) chain A
residue 1001
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1104
source : AC4

17) chain B
residue 76
type CROSSLNK
sequence G
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI6

18) chain B
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

19) chain B
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

20) chain B
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

21) chain B
residue 76
type MOD_RES
sequence G
description ADP-ribosylglycine => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI4

22) chain B
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI3

23) chain A
residue 874
type MOD_RES
sequence C
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI3

24) chain A
residue 890
type MOD_RES
sequence C
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI3

25) chain A
residue 893
type MOD_RES
sequence C
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 898
type MOD_RES
sequence C
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI3

27) chain A
residue 901
type MOD_RES
sequence C
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI3

28) chain A
residue 916
type MOD_RES
sequence C
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI3

29) chain A
residue 925
type MOD_RES
sequence H
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI3

30) chain B
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI5

31) chain B
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI5

32) chain B
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI5

33) chain B
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI5

34) chain B
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI5

35) chain B
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI5

36) chain B
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
source Swiss-Prot : SWS_FT_FI5

37) chain A
residue 893-902
type prosite
sequence CRHQFCSGCY
description ZF_RING_1 Zinc finger RING-type signature. CrHqFCsgCY
source prosite : PS00518

38) chain B
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299


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