eF-site ID 4ldl-AB
PDB Code 4ldl
Chain A, B

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Title Structure of beta2 adrenoceptor bound to hydroxybenzylisoproterenol and an engineered nanobody
Classification MEMBRANE PROTEIN/HYDROLASE
Compound Lysozyme, Beta-2 adrenergic receptor
Source Homo sapiens (Human) (4LDL)
Sequence A:  DAENLYFQGNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHL
LTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVD
AAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVA
GFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITT
FRTGTWDAYAADEVWVVGMGIVMSLIVLAIVFGNVLVITA
IAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTK
TWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITS
PFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRAT
HQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVF
VYSRVFQEAKRQLQKFALKEHKALKTLGIIMGTFTLCWLP
FFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR
SPDFRIAFQELLCL
B:  QVQLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQA
PGKQRELVAAIHSGGTTNYANSVKGRFTISRDNAANTVYL
QMNSLKPEDTAVYYCNVKDFGAIIYDYDYWGQGTQVTVSS
Description


Functional site

1) chain A
residue 1113
type
sequence D
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

2) chain A
residue 1191
type
sequence C
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

3) chain A
residue 1192
type
sequence D
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

4) chain A
residue 1193
type
sequence F
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

5) chain A
residue 1203
type
sequence S
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

6) chain A
residue 1207
type
sequence S
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

7) chain A
residue 1289
type
sequence F
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

8) chain A
residue 1293
type
sequence N
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

9) chain A
residue 1309
type
sequence I
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

10) chain A
residue 1312
type
sequence N
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

11) chain A
residue 1316
type
sequence Y
description BINDING SITE FOR RESIDUE XQC A 1401
source : AC1

12) chain A
residue 1103
type
sequence N
description BINDING SITE FOR RESIDUE NA A 1402
source : AC2

13) chain A
residue 1184
type
sequence C
description BINDING SITE FOR RESIDUE NA A 1402
source : AC2

14) chain A
residue 1185
type
sequence Y
description BINDING SITE FOR RESIDUE NA A 1402
source : AC2

15) chain A
residue 1187
type
sequence E
description BINDING SITE FOR RESIDUE NA A 1402
source : AC2

16) chain A
residue 1190
type
sequence C
description BINDING SITE FOR RESIDUE NA A 1402
source : AC2

17) chain A
residue 1306
type
sequence E
description BINDING SITE FOR RESIDUE 1WV A 1403
source : AC3

18) chain A
residue 1313
type
sequence W
description BINDING SITE FOR RESIDUE 1WV A 1403
source : AC3

19) chain A
residue 897
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:8266098
source Swiss-Prot : SWS_FT_FI3

20) chain A
residue 969
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:8266098
source Swiss-Prot : SWS_FT_FI3

21) chain A
residue 982
type BINDING
sequence S
description BINDING => ECO:0000303|PubMed:7831309
source Swiss-Prot : SWS_FT_FI4

22) chain A
residue 997
type BINDING
sequence N
description BINDING => ECO:0000303|PubMed:7831309
source Swiss-Prot : SWS_FT_FI4

23) chain A
residue 1035-1058
type TRANSMEM
sequence GMGIVMSLIVLAIVFGNVLVITAI
description Helical; Name=1
source Swiss-Prot : SWS_FT_FI5

24) chain A
residue 1059-1071
type TOPO_DOM
sequence AKFERLQTVTNYF
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI6

25) chain A
residue 1130-1150
type TOPO_DOM
sequence DRYFAITSPFKYQSLLTKNKA
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI6

26) chain A
residue 1221-1302
type TOPO_DOM
sequence RVFQEAKRQLQKFALKEHKALKTLGIIMGTFTLCWLPFFI
VNIVHVIQDNL
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI6

27) chain A
residue 1072-1095
type TRANSMEM
sequence ITSLACADLVMGLAVVPFGAAHIL
description Helical; Name=2
source Swiss-Prot : SWS_FT_FI7

28) chain A
residue 1096-1106
type TOPO_DOM
sequence TKTWTFGNFWC
description Extracellular
source Swiss-Prot : SWS_FT_FI8

29) chain A
residue 1175-1196
type TOPO_DOM
sequence RATHQEAINCYAEETCCDFFTN
description Extracellular
source Swiss-Prot : SWS_FT_FI8

30) chain A
residue 1327-1333
type TOPO_DOM
sequence CRSPDFR
description Extracellular
source Swiss-Prot : SWS_FT_FI8

31) chain A
residue 1107-1129
type TRANSMEM
sequence EFWTSIDVLCVTASIETLCVIAV
description Helical; Name=3
source Swiss-Prot : SWS_FT_FI9

32) chain A
residue 1151-1174
type TRANSMEM
sequence RVIILMVWIVSGLTSFLPIQMHWY
description Helical; Name=4
source Swiss-Prot : SWS_FT_FI10

33) chain A
residue 1197-1220
type TRANSMEM
sequence QAYAIASSIVSFYVPLVIMVFVYS
description Helical; Name=5
source Swiss-Prot : SWS_FT_FI11

34) chain A
residue 1303-1326
type TRANSMEM
sequence IRKEVYILLNWIGYVNSGFNPLIY
description Helical; Name=6
source Swiss-Prot : SWS_FT_FI12

35) chain A
residue 1113
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:18547522, ECO:0007744|PDB:3D4S
source Swiss-Prot : SWS_FT_FI14

36) chain A
residue 1118
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:18547522, ECO:0007744|PDB:3D4S
source Swiss-Prot : SWS_FT_FI14

37) chain A
residue 1321
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:18547522, ECO:0007744|PDB:3D4S
source Swiss-Prot : SWS_FT_FI14

38) chain A
residue 1340
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:18547522, ECO:0007744|PDB:3D4S
source Swiss-Prot : SWS_FT_FI14

39) chain A
residue 1203
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17952055, ECO:0000269|PubMed:17962520, ECO:0007744|PDB:2RH1
source Swiss-Prot : SWS_FT_FI15

40) chain A
residue 1141
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000269|PubMed:8521811
source Swiss-Prot : SWS_FT_FI16

41) chain A
residue 1274
type MOD_RES
sequence T
description Phosphoserine => ECO:0007744|PubMed:17525332
source Swiss-Prot : SWS_FT_FI17

42) chain A
residue 1289
type MOD_RES
sequence F
description Phosphoserine; by PKA => ECO:0000255
source Swiss-Prot : SWS_FT_FI18

43) chain A
residue 1290
type MOD_RES
sequence F
description Phosphoserine; by PKA => ECO:0000255
source Swiss-Prot : SWS_FT_FI18

44) chain A
residue 1293
type LIPID
sequence N
description S-palmitoyl cysteine => ECO:0000269|PubMed:27481942
source Swiss-Prot : SWS_FT_FI20

45) chain A
residue 876
type ACT_SITE
sequence E
description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04110, ECO:0000269|PubMed:3382407, ECO:0000269|PubMed:7831309, ECO:0000269|PubMed:8266098
source Swiss-Prot : SWS_FT_FI1

46) chain A
residue 885
type ACT_SITE
sequence D
description Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04110, ECO:0000269|PubMed:1892846, ECO:0000269|PubMed:3382407, ECO:0000269|PubMed:7831309, ECO:0000269|PubMed:8266098
source Swiss-Prot : SWS_FT_FI2

47) chain A
residue 1119-1135
type prosite
sequence ASIETLCVIAVDRYFAI
description G_PROTEIN_RECEP_F1_1 G-protein coupled receptors family 1 signature. ASIeTLCVIAVDRYFaI
source prosite : PS00237

48) chain A
residue 876
type catalytic
sequence E
description 921
source MCSA : MCSA1

49) chain A
residue 885
type catalytic
sequence D
description 921
source MCSA : MCSA1


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