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|
eF-site ID
|
4ld9-B |
|
PDB Code
|
4ld9 |
|
Chain
|
B |
|
click to enlarge
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Title
|
Crystal structure of the N-terminally acetylated BAH domain of Sir3 bound to the nucleosome core particle |
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Classification
|
NUCLEAR PROTEIN/TRANSCRIPTION/DNA |
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Compound
|
Histone H3.2 |
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Source
|
Xenopus laevis (African clawed frog) (4LD9) |
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Sequence
|
B: |
KGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIY
EETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALK
RQGRTLYGF
|
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Description
|
(1) |
Histone H3.2, Histone H4, Histone H2A, Histone H2B 1.1, Regulatory protein SIR3
|
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Functional site
|
|
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1)
|
chain |
B |
| residue |
14-18 |
| type |
prosite |
| sequence |
GAKRH
|
| description |
HISTONE_H4 Histone H4 signature. GAKRH
|
| source |
prosite : PS00047
|
|
|
2)
|
chain |
B |
| residue |
59 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI10
|
|
|
3)
|
chain |
B |
| residue |
77 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-succinyllysine => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI11
|
|
|
4)
|
chain |
B |
| residue |
31 |
| type |
CROSSLNK |
| sequence |
K
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI12
|
|
|
5)
|
chain |
B |
| residue |
91 |
| type |
CROSSLNK |
| sequence |
K
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI13
|
|
|
6)
|
chain |
B |
| residue |
51 |
| type |
MOD_RES |
| sequence |
Y
|
| description |
Phosphotyrosine => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI9
|
|
|
7)
|
chain |
B |
| residue |
88 |
| type |
MOD_RES |
| sequence |
Y
|
| description |
Phosphotyrosine => ECO:0000250|UniProtKB:P62805
|
| source |
Swiss-Prot : SWS_FT_FI9
|
|
|
|