eF-site ID 4khr-B
PDB Code 4khr
Chain B

click to enlarge
Title HCV NS5B GT1A C316Y with GSK5852
Classification REPLICATION/REPLICATION INHIBITOR
Compound NS5B RNA-dependent RNA polymerase
Source Hepatitis C virus subtype 1a (B1PPP0_9HEPC)
Sequence B:  SMSYSWTGALVTPCAAEEQKLPINALSNSLLRHHNLVYST
TSRSACQRQKKVTFDRLQVLDSHYQDVLKEVKAAASKVKA
NLLSVEEACSLTPPHSAKSKYGYGAKDVRSHASRAVAHIN
SVWKDLLEDSVTPIDTTIMAKNEVFCVQPEKGGRKPARLI
VFPDLGVRVCEKMALYDVVSKLPLAVMGSSYGFQYSPGQR
VEFLVQAWKSKKTPMGFSYDTRCFDSTVTESDIRTEEAIY
QCCDLDPQARVAIKSLTERLYVGGPLTNSRGENCGYRRCR
ASGVLTTSCGNTLTCYIKARAACRAAGLQDCTMLVYGDDL
VVICESAGVQEDAASLRAFTEAMTRYSAPPGDPPQPEYDL
ELITSCSSNVSVAHDGAGKRVYYLTRDPTTPLARAAWETA
RHTPVNSWLGNIIMFAPTLWARMILMTHFFSVLIARDQLE
QALDCEIYGACYSIEPLDLPPIIQRLHGLSAFSLHSYSPG
EINRVAACLRKLGVPPLRAWRHRARSVRARLLSRGGRAAI
CGKYLFNWAVRTKLKLTPIAAAGQLALSGWFTAGYSGGDI
YH
Description


Functional site

1) chain B
residue 209
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 601
source : AC5

2) chain B
residue 380
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 601
source : AC5

3) chain B
residue 382
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 B 601
source : AC5

4) chain B
residue 359
type
sequence D
description BINDING SITE FOR RESIDUE SO4 B 602
source : AC6

5) chain B
residue 516
type
sequence G
description BINDING SITE FOR RESIDUE SO4 B 603
source : AC7

6) chain B
residue 517
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 603
source : AC7

7) chain B
residue 24
type
sequence N
description BINDING SITE FOR RESIDUE SO4 B 604
source : AC8

8) chain B
residue 26
type
sequence L
description BINDING SITE FOR RESIDUE SO4 B 604
source : AC8

9) chain B
residue 436
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 604
source : AC8

10) chain B
residue 48
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 605
source : AC9

11) chain B
residue 51
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 605
source : AC9

12) chain B
residue 222
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 605
source : AC9

13) chain B
residue 223
type
sequence C
description BINDING SITE FOR RESIDUE SO4 B 605
source : AC9

14) chain B
residue 96
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 606
source : BC1

15) chain B
residue 97
type
sequence A
description BINDING SITE FOR RESIDUE SO4 B 606
source : BC1

16) chain B
residue 168
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 606
source : BC1

17) chain B
residue 559
type
sequence D
description BINDING SITE FOR RESIDUE SO4 B 606
source : BC1

18) chain B
residue 505
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 607
source : BC2

19) chain B
residue 531
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 607
source : BC2

20) chain B
residue 532
type
sequence T
description BINDING SITE FOR RESIDUE SO4 B 607
source : BC2


Display surface

Download
Links