eF-site ID 4kbn-B
PDB Code 4kbn
Chain B

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Title human dihydrofolate reductase complexed with NADPH and 5-{3-[3-(3,5-pyrimidine)]-phenyl-prop-1-yn-1-yl}-6-ethyl-pyrimidine-2,4diamine
Classification OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Compound Dihydrofolate reductase
Source Homo sapiens (Human) (DYR_HUMAN)
Sequence B:  VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTT
SSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELK
EPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSV
YKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLP
EYPGVLSDVQEEKGIKYKFEVYEKND
Description


Functional site

1) chain B
residue 139
type
sequence M
description BINDING SITE FOR RESIDUE CL A 206
source : AC6

2) chain B
residue 1
type
sequence V
description BINDING SITE FOR RESIDUE SR B 201
source : BC3

3) chain B
residue 2
type
sequence G
description BINDING SITE FOR RESIDUE SR B 201
source : BC3

4) chain B
residue 3
type
sequence S
description BINDING SITE FOR RESIDUE SR B 201
source : BC3

5) chain B
residue 7
type
sequence I
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

6) chain B
residue 8
type
sequence V
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

7) chain B
residue 9
type
sequence A
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

8) chain B
residue 22
type
sequence L
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

9) chain B
residue 30
type
sequence E
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

10) chain B
residue 31
type
sequence F
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

11) chain B
residue 34
type
sequence F
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

12) chain B
residue 56
type
sequence T
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

13) chain B
residue 60
type
sequence I
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

14) chain B
residue 61
type
sequence P
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

15) chain B
residue 67
type
sequence L
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

16) chain B
residue 115
type
sequence V
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

17) chain B
residue 121
type
sequence Y
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

18) chain B
residue 136
type
sequence T
description BINDING SITE FOR RESIDUE 25U B 202
source : BC4

19) chain B
residue 173
type
sequence K
description BINDING SITE FOR RESIDUE EOH B 203
source : BC5

20) chain B
residue 62
type
sequence E
description BINDING SITE FOR RESIDUE EOH B 204
source : BC6

21) chain B
residue 3
type
sequence S
description BINDING SITE FOR RESIDUE CL B 205
source : BC7

22) chain B
residue 5
type
sequence N
description BINDING SITE FOR RESIDUE CL B 205
source : BC7

23) chain B
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MG B 206
source : BC8

24) chain B
residue 163
type
sequence P
description BINDING SITE FOR RESIDUE CL B 207
source : BC9

25) chain B
residue 35
type
sequence Q
description BINDING SITE FOR RESIDUE CL B 208
source : CC1

26) chain B
residue 110
type
sequence D
description BINDING SITE FOR RESIDUE MG B 210
source : CC2

27) chain B
residue 22
type
sequence L
description BINDING SITE FOR RESIDUE NH4 B 211
source : CC3

28) chain B
residue 24
type
sequence W
description BINDING SITE FOR RESIDUE NH4 B 211
source : CC3

29) chain B
residue 18
type
sequence K
description BINDING SITE FOR RESIDUE MG B 212
source : CC4

30) chain B
residue 19
type
sequence N
description BINDING SITE FOR RESIDUE MG B 212
source : CC4

31) chain B
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MG B 212
source : CC4

32) chain B
residue 145
type
sequence D
description BINDING SITE FOR RESIDUE MG B 212
source : CC4

33) chain B
residue 146
type
sequence T
description BINDING SITE FOR RESIDUE MG B 212
source : CC4

34) chain B
residue 153
type
sequence L
description BINDING SITE FOR RESIDUE MG B 213
source : CC5

35) chain B
residue 156
type
sequence Y
description BINDING SITE FOR RESIDUE MG B 213
source : CC5

36) chain B
residue 8
type
sequence V
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

37) chain B
residue 9
type
sequence A
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

38) chain B
residue 16
type
sequence I
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

39) chain B
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

40) chain B
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

41) chain B
residue 53
type
sequence G
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

42) chain B
residue 54
type
sequence K
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

43) chain B
residue 55
type
sequence K
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

44) chain B
residue 56
type
sequence T
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

45) chain B
residue 75
type
sequence L
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

46) chain B
residue 76
type
sequence S
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

47) chain B
residue 77
type
sequence R
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

48) chain B
residue 78
type
sequence E
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

49) chain B
residue 91
type
sequence R
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

50) chain B
residue 115
type
sequence V
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

51) chain B
residue 117
type
sequence G
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

52) chain B
residue 118
type
sequence S
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

53) chain B
residue 119
type
sequence S
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

54) chain B
residue 120
type
sequence V
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

55) chain B
residue 121
type
sequence Y
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

56) chain B
residue 123
type
sequence E
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

57) chain B
residue 146
type
sequence T
description BINDING SITE FOR RESIDUE NDP B 214
source : CC6

58) chain B
residue 22
type catalytic
sequence L
description 490
source MCSA : MCSA2

59) chain B
residue 30
type catalytic
sequence E
description 490
source MCSA : MCSA2

60) chain B
residue 116
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15039552, ECO:0000269|PubMed:16222560, ECO:0000269|PubMed:19478082
source Swiss-Prot : SWS_FT_FI1

61) chain B
residue 9
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:15039552, ECO:0000269|PubMed:16222560, ECO:0000269|PubMed:19478082
source Swiss-Prot : SWS_FT_FI1

62) chain B
residue 15
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15039552, ECO:0000269|PubMed:16222560, ECO:0000269|PubMed:19478082
source Swiss-Prot : SWS_FT_FI1

63) chain B
residue 54
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:15039552, ECO:0000269|PubMed:16222560, ECO:0000269|PubMed:19478082
source Swiss-Prot : SWS_FT_FI1

64) chain B
residue 76
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:15039552, ECO:0000269|PubMed:16222560, ECO:0000269|PubMed:19478082
source Swiss-Prot : SWS_FT_FI1

65) chain B
residue 30
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:2248959
source Swiss-Prot : SWS_FT_FI2

66) chain B
residue 64
type BINDING
sequence N
description BINDING => ECO:0000305|PubMed:2248959
source Swiss-Prot : SWS_FT_FI2

67) chain B
residue 70
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:2248959
source Swiss-Prot : SWS_FT_FI2


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