eF-site ID 4kbi-A
PDB Code 4kbi
Chain A

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Title HCV NS5B GT1B N316Y with CMPD 4
Classification REPLICATION/REPLICATION INHIBITOR
Compound HCV Polymerase
Source Hepatitis C virus genotype 1b (isolate BK) (HCV) (POLG_HCVBK)
Sequence A:  SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYAT
TSRSAGQRQKKVTFDRLQVLDDHYRDVLKEMKAKASTVKA
KLLSVEEACKLTPPHSAKSKYGYGAKDVRNLSSRAVNHIH
SVWKDLLEDTVTPIDTTIMAKNEVFCVQRKPARLIVFPDL
GVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQRVEFLV
NTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDL
APEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVL
TTSCGNTLTCYLKASAACRAAKLQDCTMLVYGDDLVVICE
SAGTQEDAASLRVFTEAMTRYSAPPGDPPQPEYDLELITS
CSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARHTPV
NSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDC
QIYGACYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRV
ASCLRKLGVPPLRVWRHRARSVRARLLSQGGRAATCGKYL
FNWAVKTKLKLTPIPYSGGDIYHS
Description


Functional site

1) chain A
residue 200
type
sequence R
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

2) chain A
residue 204
type
sequence L
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

3) chain A
residue 314
type
sequence L
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

4) chain A
residue 316
type
sequence Y
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

5) chain A
residue 321
type
sequence V
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

6) chain A
residue 363
type
sequence I
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

7) chain A
residue 365
type
sequence S
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

8) chain A
residue 366
type
sequence C
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

9) chain A
residue 368
type
sequence S
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

10) chain A
residue 384
type
sequence L
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

11) chain A
residue 414
type
sequence M
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

12) chain A
residue 415
type
sequence Y
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

13) chain A
residue 447
type
sequence I
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

14) chain A
residue 448
type
sequence Y
description BINDING SITE FOR RESIDUE 1C0 A 601
source : AC1

15) chain A
residue 29
type MOD_RES
sequence S
description Phosphoserine; by host => ECO:0000250|UniProtKB:P26662
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 42
type MOD_RES
sequence S
description Phosphoserine; by host => ECO:0000250|UniProtKB:P26662
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 220
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:10557268, ECO:0000305|PubMed:11884572
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 318
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:10557268, ECO:0000305|PubMed:11884572
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 319
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:10557268, ECO:0000305|PubMed:11884572
source Swiss-Prot : SWS_FT_FI1


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