eF-site ID 4k1r-ABCD PDB Code 4k1r Chain A, B, C, D click to enlarge Title Crystal structure of Schizosaccharomyces pombe sst2 catalytic domain and Ubiquitin Classification HYDROLASE Compound AMSH-like protease sst2 Source Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (UBC_HUMAN) Sequence A:  TFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLE TCGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLF EFQDKHNLLTLGWIHTHPTQTCFMSSVDLHTHCSYQLMLP EAIAIVMAPSKNTSGIFRLLDPEGLQTIVKCRKPGLFHPH EGKVYTMVAQPGHVREINSKLQVVDLRVK B:  SMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG C:  TFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLE TCGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLF EFQDKHNLLTLGWIHTHPTQTCFMSSVDLHTHCSYQLMLP EAIAIVMAPSKNTSGIFRLLDPEGLQTIVKCRKPGLFHPH EGKVYTMVAQPGHVREINSKLQVVDLRVK D:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG Description Functional site 1) chain A residue 304 type sequence H description BINDING SITE FOR RESIDUE ZN A 501 source : AC1 2) chain A residue 332 type sequence H description BINDING SITE FOR RESIDUE ZN A 501 source : AC1 3) chain C residue 327 type sequence E description BINDING SITE FOR RESIDUE ZN A 501 source : AC1 4) chain A residue 341 type sequence H description BINDING SITE FOR RESIDUE ZN A 502 source : AC2 5) chain A residue 343 type sequence H description BINDING SITE FOR RESIDUE ZN A 502 source : AC2 6) chain A residue 354 type sequence D description BINDING SITE FOR RESIDUE ZN A 502 source : AC2 7) chain B residue 76 type sequence G description BINDING SITE FOR RESIDUE ZN A 502 source : AC2 8) chain A residue 356 type sequence H description BINDING SITE FOR RESIDUE ZN A 503 source : AC3 9) chain A residue 397 type sequence C description BINDING SITE FOR RESIDUE ZN A 503 source : AC3 10) chain A residue 404 type sequence H description BINDING SITE FOR RESIDUE ZN A 503 source : AC3 11) chain A residue 406 type sequence H description BINDING SITE FOR RESIDUE ZN A 503 source : AC3 12) chain A residue 304 type sequence H description BINDING SITE FOR RESIDUE CL A 504 source : AC4 13) chain A residue 332 type sequence H description BINDING SITE FOR RESIDUE CL A 504 source : AC4 14) chain A residue 428 type sequence Q description BINDING SITE FOR RESIDUE CL A 504 source : AC4 15) chain C residue 327 type sequence E description BINDING SITE FOR RESIDUE CL A 504 source : AC4 16) chain C residue 328 type sequence F description BINDING SITE FOR RESIDUE CL A 504 source : AC4 17) chain A residue 329 type sequence Q description BINDING SITE FOR RESIDUE EDO A 505 source : AC5 18) chain A residue 333 type sequence N description BINDING SITE FOR RESIDUE EDO A 505 source : AC5 19) chain A residue 334 type sequence L description BINDING SITE FOR RESIDUE EDO A 505 source : AC5 20) chain A residue 335 type sequence L description BINDING SITE FOR RESIDUE EDO A 505 source : AC5 21) chain B residue 8 type sequence L description BINDING SITE FOR RESIDUE EDO A 505 source : AC5 22) chain A residue 346 type sequence Q description BINDING SITE FOR RESIDUE EDO A 506 source : AC6 23) chain A residue 349 type sequence F description BINDING SITE FOR RESIDUE EDO A 506 source : AC6 24) chain B residue 76 type sequence G description BINDING SITE FOR RESIDUE EDO A 506 source : AC6 25) chain A residue 345 type sequence T description BINDING SITE FOR RESIDUE EDO A 507 source : AC7 26) chain A residue 376 type sequence S description BINDING SITE FOR RESIDUE EDO A 507 source : AC7 27) chain A residue 377 type sequence K description BINDING SITE FOR RESIDUE EDO A 507 source : AC7 28) chain A residue 270 type sequence K description BINDING SITE FOR RESIDUE EDO A 508 source : AC8 29) chain A residue 380 type sequence S description BINDING SITE FOR RESIDUE EDO A 508 source : AC8 30) chain A residue 381 type sequence G description BINDING SITE FOR RESIDUE EDO A 508 source : AC8 31) chain A residue 382 type sequence I description BINDING SITE FOR RESIDUE EDO A 508 source : AC8 32) chain A residue 416 type sequence Q description BINDING SITE FOR RESIDUE EDO A 508 source : AC8 33) chain A residue 422 type sequence E description BINDING SITE FOR RESIDUE EDO A 508 source : AC8 34) chain A residue 294 type sequence K description BINDING SITE FOR RESIDUE EDO A 509 source : AC9 35) chain A residue 296 type sequence R description BINDING SITE FOR RESIDUE EDO A 509 source : AC9 36) chain B residue 7 type sequence T description BINDING SITE FOR RESIDUE EDO B 101 source : BC1 37) chain B residue 8 type sequence L description BINDING SITE FOR RESIDUE EDO B 101 source : BC1 38) chain B residue 69 type sequence L description BINDING SITE FOR RESIDUE EDO B 101 source : BC1 39) chain B residue 70 type sequence V description BINDING SITE FOR RESIDUE EDO B 101 source : BC1 40) chain B residue 71 type sequence L description BINDING SITE FOR RESIDUE EDO B 101 source : BC1 41) chain C residue 341 type sequence H description BINDING SITE FOR RESIDUE ZN C 501 source : BC2 42) chain C residue 343 type sequence H description BINDING SITE FOR RESIDUE ZN C 501 source : BC2 43) chain C residue 354 type sequence D description BINDING SITE FOR RESIDUE ZN C 501 source : BC2 44) chain D residue 76 type sequence G description BINDING SITE FOR RESIDUE ZN C 501 source : BC2 45) chain C residue 356 type sequence H description BINDING SITE FOR RESIDUE ZN C 502 source : BC3 46) chain C residue 397 type sequence C description BINDING SITE FOR RESIDUE ZN C 502 source : BC3 47) chain C residue 404 type sequence H description BINDING SITE FOR RESIDUE ZN C 502 source : BC3 48) chain C residue 406 type sequence H description BINDING SITE FOR RESIDUE ZN C 502 source : BC3 49) chain A residue 327 type sequence E description BINDING SITE FOR RESIDUE ZN C 503 source : BC4 50) chain C residue 304 type sequence H description BINDING SITE FOR RESIDUE ZN C 503 source : BC4 51) chain C residue 332 type sequence H description BINDING SITE FOR RESIDUE ZN C 503 source : BC4 52) chain A residue 327 type sequence E description BINDING SITE FOR RESIDUE CL C 504 source : BC5 53) chain A residue 328 type sequence F description BINDING SITE FOR RESIDUE CL C 504 source : BC5 54) chain C residue 304 type sequence H description BINDING SITE FOR RESIDUE CL C 504 source : BC5 55) chain C residue 332 type sequence H description BINDING SITE FOR RESIDUE CL C 504 source : BC5 56) chain C residue 428 type sequence Q description BINDING SITE FOR RESIDUE CL C 504 source : BC5 57) chain A residue 311 type sequence E description BINDING SITE FOR RESIDUE EDO C 505 source : BC6 58) chain A residue 316 type sequence T description BINDING SITE FOR RESIDUE EDO C 505 source : BC6 59) chain A residue 317 type sequence C description BINDING SITE FOR RESIDUE EDO C 505 source : BC6 60) chain A residue 318 type sequence G description BINDING SITE FOR RESIDUE EDO C 505 source : BC6 61) chain B residue 74 type sequence R description BINDING SITE FOR RESIDUE EDO C 505 source : BC6 62) chain C residue 313 type sequence T description BINDING SITE FOR RESIDUE EDO C 505 source : BC6 63) chain C residue 315 type sequence D description BINDING SITE FOR RESIDUE EDO C 505 source : BC6 64) chain C residue 333 type sequence N description BINDING SITE FOR RESIDUE EDO C 506 source : BC7 65) chain C residue 334 type sequence L description BINDING SITE FOR RESIDUE EDO C 506 source : BC7 66) chain D residue 8 type sequence L description BINDING SITE FOR RESIDUE EDO C 506 source : BC7 67) chain C residue 352 type sequence S description BINDING SITE FOR RESIDUE EDO C 507 source : BC8 68) chain C residue 353 type sequence V description BINDING SITE FOR RESIDUE EDO C 507 source : BC8 69) chain C residue 356 type sequence H description BINDING SITE FOR RESIDUE EDO C 507 source : BC8 70) chain C residue 401 type sequence G description BINDING SITE FOR RESIDUE EDO C 507 source : BC8 71) chain C residue 402 type sequence L description BINDING SITE FOR RESIDUE EDO C 507 source : BC8 72) chain C residue 404 type sequence H description BINDING SITE FOR RESIDUE EDO C 507 source : BC8 73) chain D residue 7 type sequence T description BINDING SITE FOR RESIDUE EDO D 101 source : BC9 74) chain D residue 8 type sequence L description BINDING SITE FOR RESIDUE EDO D 101 source : BC9 75) chain D residue 69 type sequence L description BINDING SITE FOR RESIDUE EDO D 101 source : BC9 76) chain D residue 70 type sequence V description BINDING SITE FOR RESIDUE EDO D 101 source : BC9 77) chain D residue 71 type sequence L description BINDING SITE FOR RESIDUE EDO D 101 source : BC9 78) chain B residue 0 type MOD_RES sequence S description ADP-ribosylglycine => ECO:0000269|PubMed:28525742 source Swiss-Prot : SWS_FT_FI1 79) chain A residue 353 type MOD_RES sequence V description ADP-ribosylglycine => ECO:0000269|PubMed:28525742 source Swiss-Prot : SWS_FT_FI1 80) chain C residue 340 type MOD_RES sequence I description ADP-ribosylglycine => ECO:0000269|PubMed:28525742 source Swiss-Prot : SWS_FT_FI1 81) chain C residue 342 type MOD_RES sequence T description ADP-ribosylglycine => ECO:0000269|PubMed:28525742 source Swiss-Prot : SWS_FT_FI1 82) chain C residue 353 type MOD_RES sequence V description ADP-ribosylglycine => ECO:0000269|PubMed:28525742 source Swiss-Prot : SWS_FT_FI1 83) chain B residue 0 type CROSSLNK sequence S description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI2 84) chain A residue 396 type CROSSLNK sequence K description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI2 85) chain A residue 405 type CROSSLNK sequence P description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI2 86) chain C residue 355 type CROSSLNK sequence L description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI2 87) chain C residue 396 type CROSSLNK sequence K description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI2 88) chain C residue 403 type CROSSLNK sequence F description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI2 89) chain C residue 405 type CROSSLNK sequence P description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) source Swiss-Prot : SWS_FT_FI2 90) chain B residue 27-52 type prosite sequence KAKIQDKEGIPPDQQRLIFAGKQLED description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD source prosite : PS00299 91) chain A residue 285 type SITE sequence L description Indirect zinc-binding => ECO:0000250 source Swiss-Prot : SWS_FT_FI3 92) chain C residue 285 type SITE sequence L description Indirect zinc-binding => ECO:0000250 source Swiss-Prot : SWS_FT_FI3

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