eF-site ID 4jnt-AB PDB Code 4jnt Chain A, B click to enlarge Title Crystal structure of the ectodomain of Bovine viral diarrhea virus 1 E2 envelope protein Classification VIRAL PROTEIN Compound Envelope glycoprotein E2 Source Bovine viral diarrhea virus (isolate NADL) (BVDV) (Mucosal disease virus) (POLG_BVDVN) Sequence A:  LDCKPEFSYAIAKDERIGQLGAEGLTTTWKEYSPGMKLED TMVIAWCEDGKLMYLQRCTRETRYLAILHTRALPTSVVFK KLFDGRKQEDVVEMDDNFEFGLCPCDAKPIVRGKFNTTLL NGPAFQMVCPIGWTGTVSCTSFNMDTLATTVVRTYRRSKP FPHRQGCITQKNLGEDLHNCILGGNWTCVPGDQLLYKGGS IESCKWCGYQFKESEGLPHYPIGKCKLENETGYRLVDSTS CNREGVAIVPQGTLKCKIGKTTVQVIAMDTKLGPMPCRPY EIISSTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYW FDLE B:  LDCKPEFSYAIAKDERIGQLGAEGLTTTWKEYSPGMKLED TMVIAWCEDGKLMYLQRCTRETRYLAILHTRALPTSVVFK KLFDGRKQEDVVEMDDNFEFGLCPCDAKPIVRGKFNTTLL NGPAFQMVCPIGWTGTVSCTSFNMDTLATTVVRTYRRSKP FPHRQGCITQKNLGEDLHNCILGGNWTCVPGDQLLYKGGS IESCKWCGYQFKESEGLPHYPIGKCKLENETGYRLVDSTS CNREGVAIVPQGTLKCKIGKTTVQVIAMDTKLGPMPCRPY EIISSTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYW FDLE Description Functional site 1) chain A residue 762 type SITE sequence H description Serves as pH sensor to control fusion => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI1 2) chain B residue 762 type SITE sequence H description Serves as pH sensor to control fusion => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI1 3) chain A residue 809 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI2 4) chain A residue 878 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI2 5) chain A residue 922 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI2 6) chain A residue 990 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI2 7) chain B residue 809 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI2 8) chain B residue 878 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI2 9) chain B residue 922 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI2 10) chain B residue 990 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276 source Swiss-Prot : SWS_FT_FI2

Display surface Download Links