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eF-site ID
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4jnt-A |
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PDB Code
|
4jnt |
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Chain
|
A |
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click to enlarge
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Title
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Crystal structure of the ectodomain of Bovine viral diarrhea virus 1 E2 envelope protein |
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Classification
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VIRAL PROTEIN |
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Compound
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Envelope glycoprotein E2 |
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Source
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Bovine viral diarrhea virus (isolate NADL) (BVDV) (Mucosal disease virus) (POLG_BVDVN) |
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Sequence
|
A: |
LDCKPEFSYAIAKDERIGQLGAEGLTTTWKEYSPGMKLED
TMVIAWCEDGKLMYLQRCTRETRYLAILHTRALPTSVVFK
KLFDGRKQEDVVEMDDNFEFGLCPCDAKPIVRGKFNTTLL
NGPAFQMVCPIGWTGTVSCTSFNMDTLATTVVRTYRRSKP
FPHRQGCITQKNLGEDLHNCILGGNWTCVPGDQLLYKGGS
IESCKWCGYQFKESEGLPHYPIGKCKLENETGYRLVDSTS
CNREGVAIVPQGTLKCKIGKTTVQVIAMDTKLGPMPCRPY
EIISSTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYW
FDLE
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Description
|
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Functional site
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|
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1)
|
chain |
A |
| residue |
762 |
| type |
SITE |
| sequence |
H
|
| description |
Serves as pH sensor to control fusion => ECO:0000269|PubMed:23569276
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
2)
|
chain |
A |
| residue |
809 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
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3)
|
chain |
A |
| residue |
878 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
4)
|
chain |
A |
| residue |
922 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
5)
|
chain |
A |
| residue |
990 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:23569276
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|