eF-site ID 4jdv-ABHL
PDB Code 4jdv
Chain A, B, H, L

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Title Crystal structure of germ-line precursor of NIH45-46 Fab
Classification IMMUNE SYSTEM
Compound Fab heavy chain
Source (4JDV)
Sequence A:  VQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAP
GQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYM
ELSRLRSDDTAVYYCARGKYCTARDYYNWDFQHWGQGTLV
TVSSASTKGPSVFPLAPSSKGTAALGCLVKDYFPEPVTVS
WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQT
YICNVNHKPSNTKVDKRVEPKSCDKTH
B:  IVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPG
QAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPE
DFAVYYCQQYEFFGQGTKLEIKRTVAAPSVFIFPPSDEQL
KSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTE
QDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV
TKSFNRGE
H:  VQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAP
GQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYM
ELSRLRSDDTAVYYCARGKYCTARDYYNWDFQHWGQGTLV
TVSSASTKGPSVFPLAPSTAALGCLVKDYFPEPVTVSWNS
GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLQTYICNV
NHKPSNTKVDKRVEP
L:  EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKP
GQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEP
EDFAVYYCQQYEFFGQGTKLEIKRTVAAPSVFIFPPSDEQ
LKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT
EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP
VTKSFNRGE
Description


Functional site

1) chain A
residue 82
type
sequence L
description BINDING SITE FOR RESIDUE SO4 A 301
source : AC1

2) chain A
residue 83
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 301
source : AC1

3) chain H
residue 54
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 301
source : AC1

4) chain H
residue 56
type
sequence G
description BINDING SITE FOR RESIDUE SO4 A 301
source : AC1

5) chain A
residue 7
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 302
source : AC2

6) chain A
residue 8
type
sequence G
description BINDING SITE FOR RESIDUE SO4 A 302
source : AC2

7) chain L
residue 18
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 302
source : AC2

8) chain L
residue 20
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 302
source : AC2

9) chain A
residue 170
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 303
source : AC3

10) chain A
residue 171
type
sequence P
description BINDING SITE FOR RESIDUE GOL A 303
source : AC3

11) chain A
residue 181
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 303
source : AC3

12) chain A
residue 182
type
sequence L
description BINDING SITE FOR RESIDUE GOL A 303
source : AC3

13) chain A
residue 183
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 303
source : AC3

14) chain B
residue 172
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 303
source : AC3

15) chain B
residue 173
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 303
source : AC3

16) chain B
residue 174
type
sequence T
description BINDING SITE FOR RESIDUE GOL A 303
source : AC3

17) chain A
residue 152
type
sequence E
description BINDING SITE FOR RESIDUE 144 A 304
source : AC4

18) chain A
residue 153
type
sequence P
description BINDING SITE FOR RESIDUE 144 A 304
source : AC4

19) chain A
residue 154
type
sequence V
description BINDING SITE FOR RESIDUE 144 A 304
source : AC4

20) chain A
residue 170
type
sequence F
description BINDING SITE FOR RESIDUE 144 A 304
source : AC4

21) chain A
residue 172
type
sequence A
description BINDING SITE FOR RESIDUE 144 A 304
source : AC4

22) chain A
residue 182
type
sequence L
description BINDING SITE FOR RESIDUE 144 A 304
source : AC4

23) chain B
residue 186
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 301
source : AC5

24) chain B
residue 207
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 301
source : AC5

25) chain A
residue 168
type
sequence H
description BINDING SITE FOR RESIDUE GOL B 302
source : AC6

26) chain B
residue 161
type
sequence E
description BINDING SITE FOR RESIDUE GOL B 302
source : AC6

27) chain B
residue 162
type
sequence Q
description BINDING SITE FOR RESIDUE GOL B 302
source : AC6

28) chain B
residue 163
type
sequence D
description BINDING SITE FOR RESIDUE GOL B 302
source : AC6

29) chain H
residue 152
type
sequence E
description BINDING SITE FOR RESIDUE 144 H 301
source : AC7

30) chain H
residue 153
type
sequence P
description BINDING SITE FOR RESIDUE 144 H 301
source : AC7

31) chain H
residue 154
type
sequence V
description BINDING SITE FOR RESIDUE 144 H 301
source : AC7

32) chain H
residue 170
type
sequence F
description BINDING SITE FOR RESIDUE 144 H 301
source : AC7

33) chain H
residue 172
type
sequence A
description BINDING SITE FOR RESIDUE 144 H 301
source : AC7

34) chain H
residue 182
type
sequence L
description BINDING SITE FOR RESIDUE 144 H 301
source : AC7

35) chain A
residue 61
type
sequence Q
description BINDING SITE FOR RESIDUE 1PE H 302
source : AC8

36) chain H
residue 50
type
sequence W
description BINDING SITE FOR RESIDUE 1PE H 302
source : AC8

37) chain H
residue 58
type
sequence N
description BINDING SITE FOR RESIDUE 1PE H 302
source : AC8

38) chain H
residue 102
type
sequence W
description BINDING SITE FOR RESIDUE 1PE H 302
source : AC8

39) chain L
residue 91
type
sequence Y
description BINDING SITE FOR RESIDUE 1PE H 302
source : AC8

40) chain L
residue 92
type
sequence E
description BINDING SITE FOR RESIDUE 1PE H 302
source : AC8

41) chain H
residue 62
type
sequence K
description BINDING SITE FOR RESIDUE SO4 L 301
source : AC9

42) chain H
residue 64
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 L 301
source : AC9

43) chain L
residue 186
type
sequence K
description BINDING SITE FOR RESIDUE SO4 L 301
source : AC9

44) chain L
residue 207
type
sequence R
description BINDING SITE FOR RESIDUE SO4 L 301
source : AC9

45) chain A
residue 138
type
sequence G
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

46) chain A
residue 139
type
sequence T
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

47) chain A
residue 188
type
sequence V
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

48) chain A
residue 189
type
sequence P
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

49) chain L
residue 37
type
sequence Q
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

50) chain L
residue 39
type
sequence K
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

51) chain L
residue 45
type
sequence R
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

52) chain L
residue 59
type
sequence P
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

53) chain L
residue 60
type
sequence A
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

54) chain L
residue 61
type
sequence R
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

55) chain L
residue 81
type
sequence E
description BINDING SITE FOR RESIDUE 1PE L 302
source : BC1

56) chain B
residue 188-194
type prosite
sequence YACEVTH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
source prosite : PS00290

57) chain A
residue 198-204
type prosite
sequence YICNVNH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
source prosite : PS00290


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