eF-site ID 4jd8-AB
PDB Code 4jd8
Chain A, B

click to enlarge
Title Racemic-[Ru(phen)2(dppz)]2+] bound to synthetic DNA at high resolution
Classification DNA
Compound DNA (5'-D(*AP*TP*GP*CP*AP*T)-3')
Source (4JD8)
Sequence A:  ATGCAT
B:  ATGCAT
Description


Functional site

1) chain A
residue 2
type
sequence T
description BINDING SITE FOR RESIDUE 0TN B 101
source : AC1

2) chain A
residue 3
type
sequence G
description BINDING SITE FOR RESIDUE 0TN B 101
source : AC1

3) chain A
residue 4
type
sequence C
description BINDING SITE FOR RESIDUE 0TN B 101
source : AC1

4) chain A
residue 6
type
sequence T
description BINDING SITE FOR RESIDUE 0TN B 101
source : AC1

5) chain B
residue 1
type
sequence A
description BINDING SITE FOR RESIDUE 0TN B 101
source : AC1

6) chain B
residue 4
type
sequence C
description BINDING SITE FOR RESIDUE 0TN B 101
source : AC1

7) chain B
residue 5
type
sequence A
description BINDING SITE FOR RESIDUE 0TN B 101
source : AC1

8) chain B
residue 6
type
sequence T
description BINDING SITE FOR RESIDUE 0TN B 101
source : AC1

9) chain A
residue 1
type
sequence A
description BINDING SITE FOR RESIDUE RKP B 102
source : AC2

10) chain A
residue 4
type
sequence C
description BINDING SITE FOR RESIDUE RKP B 102
source : AC2

11) chain A
residue 5
type
sequence A
description BINDING SITE FOR RESIDUE RKP B 102
source : AC2

12) chain A
residue 6
type
sequence T
description BINDING SITE FOR RESIDUE RKP B 102
source : AC2

13) chain B
residue 2
type
sequence T
description BINDING SITE FOR RESIDUE RKP B 102
source : AC2

14) chain B
residue 3
type
sequence G
description BINDING SITE FOR RESIDUE RKP B 102
source : AC2

15) chain B
residue 5
type
sequence A
description BINDING SITE FOR RESIDUE RKP B 102
source : AC2

16) chain B
residue 6
type
sequence T
description BINDING SITE FOR RESIDUE RKP B 102
source : AC2

17) chain B
residue 4
type
sequence C
description BINDING SITE FOR RESIDUE K B 103
source : AC3

18) chain B
residue 4
type
sequence C
description BINDING SITE FOR RESIDUE K B 103
source : AC3


Display surface

Download
Links