eF-site ID 4jc0-A
PDB Code 4jc0
Chain A

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Title Crystal structure of Thermotoga maritima holo RimO in complex with pentasulfide, Northeast Structural Genomics Consortium Target VR77
Classification TRANSFERASE
Compound Ribosomal protein S12 methylthiotransferase RimO
Source Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (RIMO_THEMA)
Sequence A:  RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVV
VLDTCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLV
QRYYEELKKEIPEVDQWIGVADPEEIANAIETDLVPDRYR
KRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSI
EDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPD
LLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVK
YFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDA
VLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSD
EEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSRLDRF
VGKKLKFLVEGKEGKFLVGRTWTEAPEVDGVVFVRGKGKI
GDFLEVVIKEHDEYDMWGSVILEH
Description


Functional site

1) chain A
residue 9
type
sequence G
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

2) chain A
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

3) chain A
residue 12
type
sequence K
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

4) chain A
residue 13
type
sequence N
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

5) chain A
residue 46
type
sequence C
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

6) chain A
residue 47
type
sequence A
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

7) chain A
residue 48
type
sequence F
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

8) chain A
residue 79
type
sequence C
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

9) chain A
residue 148
type
sequence C
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

10) chain A
residue 150
type
sequence R
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

11) chain A
residue 152
type
sequence C
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

12) chain A
residue 155
type
sequence C
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

13) chain A
residue 157
type
sequence I
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

14) chain A
residue 192
type
sequence Q
description BINDING SITE FOR RESIDUE FS5 A 501
source : AC1

15) chain A
residue 142-162
type prosite
sequence VKISDGCDRGCTFCSIPSFKG
description MTTASE_RADICAL Methylthiotransferase radical SAM domain signature. VkIsdGCdrgCTFCsIpsfkG
source prosite : PS01278

16) chain A
residue 148
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_01865, ECO:0000269|PubMed:23542644
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 152
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_01865, ECO:0000269|PubMed:23542644
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 155
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_01865, ECO:0000269|PubMed:23542644
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 10
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_01865, ECO:0000269|PubMed:23542644
source Swiss-Prot : SWS_FT_FI1

20) chain A
residue 46
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_01865, ECO:0000269|PubMed:23542644
source Swiss-Prot : SWS_FT_FI1

21) chain A
residue 79
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_01865, ECO:0000269|PubMed:23542644
source Swiss-Prot : SWS_FT_FI1


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