eF-site ID 4j04-B
PDB Code 4j04
Chain B

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Title Crystal structure of hcv ns5b polymerase in complex with 4-CHLORO-2-{[(2,4,5-TRICHLOROPHENYL)SULFONYL]AMINO}BENZOIC ACID
Classification TRANSFERASE/TRANSFERASE INHIBITOR
Compound Genome polyprotein
Source Hepatitis C virus genotype 1b (strain HC-J4) (HCV) (POLG_HCVJ4)
Sequence B:  SMSYTWTGALITPCAAEESKLPINPLSNSLLRHHNMVYAT
TSRSASLRQKKVTFDRLQVLDDHYRDVLKEMKAKASTVKA
KLLSIEEACKLTPPHSAKSKFGYGAKDVRNLSSRAVNHIR
SVWEDLLEDTETPIDTTIMAKSEVFCVGRKPARLIVFPDL
GVRVCEKMALYDVVSTLPQAVMGSSYGFQYSPKQRVEFLV
NTWKSKKCPMGFSYDTRCFDSTVTESDIRVEESIYQCCDL
APEARQAIRSLTERLYIGGPLTNSKGQNCGYRRCRASGVL
TTSCGNTLTCYLKATAACRAAKLQDCTMLVNGDDLVVICE
SAGTQEDAAALRAFTEAMTRYSAPPGDPPQPEYDLELITS
CSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARHTPI
NSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDC
QIYGACYSIEPLDLPQIIERLHGLSAFTLHSYSPGEINRV
ASCLRKLGVPPLRTWRHRARSVRAKLLSQGGRAATCGRYL
FNWAVRTKLKLTPIPAASQLDLSGWFVAGYSGGDIYHS
Description


Functional site

1) chain B
residue 205
type
sequence V
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

2) chain B
residue 208
type
sequence W
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

3) chain B
residue 359
type
sequence D
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

4) chain B
residue 360
type
sequence L
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

5) chain B
residue 361
type
sequence E
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

6) chain B
residue 370
type
sequence V
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

7) chain B
residue 372
type
sequence V
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

8) chain B
residue 380
type
sequence R
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

9) chain B
residue 382
type
sequence Y
description BINDING SITE FOR RESIDUE 1JF B 601
source : AC5

10) chain B
residue 359
type
sequence D
description BINDING SITE FOR RESIDUE MN B 602
source : AC6

11) chain B
residue 318
type
sequence D
description BINDING SITE FOR RESIDUE MN B 603
source : AC7

12) chain B
residue 319
type
sequence D
description BINDING SITE FOR RESIDUE MN B 603
source : AC7

13) chain B
residue 220
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P26663
source Swiss-Prot : SWS_FT_FI1

14) chain B
residue 318
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P26663
source Swiss-Prot : SWS_FT_FI1

15) chain B
residue 319
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:P26663
source Swiss-Prot : SWS_FT_FI1

16) chain B
residue 29
type MOD_RES
sequence S
description Phosphoserine; by host => ECO:0000250|UniProtKB:P26662
source Swiss-Prot : SWS_FT_FI2

17) chain B
residue 42
type MOD_RES
sequence S
description Phosphoserine; by host => ECO:0000250|UniProtKB:P26662
source Swiss-Prot : SWS_FT_FI2


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