eF-site ID 4ijp-A
PDB Code 4ijp
Chain A

click to enlarge
Title Crystal Structure of Human PRPF4B kinase domain in complex with 4-{5-[(2-Chloro-pyridin-4-ylmethyl)-carbamoyl]-thiophen-2-yl}-benzo[b]thiophene-2-carboxylic acid amine
Classification TRANSFERASE/TRANSFERASE INHIBITOR
Compound Serine/threonine-protein kinase PRP4 homolog
Source Homo sapiens (Human) (PRP4B_HUMAN)
Sequence A:  DAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNAR
ANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFH
CLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHI
KAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTI
LKLCDFGSASHVADNDITPXLVSRFYRAPEIIIGKSYDYG
IDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMP
NKMIRKGVFKDQHFDQNLNFMYIEVDEREKVTVMSTINPT
KDLLADLIQRLPEDQRKKVHQLKDLLDQILMLDPAKRISI
NQALQHAFIQE
Description (1)  Serine/threonine-protein kinase PRP4 homolog (E.C.2.7.11.1)


Functional site

1) chain A
residue 693
type
sequence T
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

2) chain A
residue 701
type
sequence V
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

3) chain A
residue 703
type
sequence R
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

4) chain A
residue 715
type
sequence A
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

5) chain A
residue 717
type
sequence K
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

6) chain A
residue 768
type
sequence E
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

7) chain A
residue 770
type
sequence L
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

8) chain A
residue 771
type
sequence S
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

9) chain A
residue 772
type
sequence M
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

10) chain A
residue 776
type
sequence E
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

11) chain A
residue 822
type
sequence L
description BINDING SITE FOR RESIDUE 1EH A 1101
source : AC1

12) chain A
residue 686
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1102
source : AC2

13) chain A
residue 709
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1102
source : AC2

14) chain A
residue 849
type
sequence X
description BINDING SITE FOR RESIDUE SO4 A 1103
source : AC3

15) chain A
residue 853
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1103
source : AC3

16) chain A
residue 856
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1103
source : AC3

17) chain A
residue 804
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1104
source : AC4

18) chain A
residue 808
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1104
source : AC4

19) chain A
residue 747
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1105
source : AC5

20) chain A
residue 748
type
sequence F
description BINDING SITE FOR RESIDUE SO4 A 1105
source : AC5

21) chain A
residue 808
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1105
source : AC5

22) chain A
residue 811-823
type prosite
sequence ILHADIKPDNILV
description PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IlHaDIKpdNILV
source prosite : PS00108

23) chain A
residue 693
type BINDING
sequence T
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2

24) chain A
residue 717
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2

25) chain A
residue 815
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10027
source Swiss-Prot : SWS_FT_FI1

26) chain A
residue 717
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI3

27) chain A
residue 849
type MOD_RES
sequence X
description Phosphotyrosine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI4

28) chain A
residue 852
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:Q5RKH1
source Swiss-Prot : SWS_FT_FI5


Display surface

Download
Links