eF-site ID 4i2x-ABCDEF
PDB Code 4i2x
Chain A, B, C, D, E, F

click to enlarge
Title Crystal structure of Signal Regulatory Protein gamma (SIRP-gamma) in complex with FabOX117
Classification IMMUNE SYSTEM
Compound FabOX117 light chain
Source ORGANISM_COMMON: human; ORGANISM_SCIENTIFIC: Homo sapiens;
Sequence A:  DIVITQSPKFMSTSVGDRVSITCKASQDVSTAVAWFQQKP
GQSPKLLIYSASYRYTGVPDRFTGSGSGTDFTFTISSVQA
EDLAVYYCQQHYSTPWTFGGGTKLEIKRADAAPTVSIFPP
SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL
NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT
STSPIVKSFNRNEC
B:  EVKLQQSGPELVKPGASVKISCKASGYSFTSYYIHWVKQR
PGQGLEWIGWVFPGSGNTKYNEKFKGKATLTADTSSSTAY
MQLSSLTSEDSAVYFCARGNYDRAWFAYWGQGTLVTVSAA
KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW
NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVT
CNVAHPASSTKVDKKIVPRDCGKHHHHHH
C:  DIVITQSPKFMSTSVGDRVSITCKASQDVSTAVAWFQQKP
GQSPKLLIYSASYRYTGVPDRFTGSGSGTDFTFTISSVQA
EDLAVYYCQQHYSTPWTFGGGTKLEIKRADAAPTVSIFPP
SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL
NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT
STSPIVKSFNRNEC
D:  EVKLQQSGPELVKPGASVKISCKASGYSFTSYYIHWVKQR
PGQGLEWIGWVFPGSGNTKYNEKFKGKATLTADTSSSTAY
MQLSSLTSEDSAVYFCARGNYDRAWFAYWGQGTLVTVSAA
KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW
NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVT
CNVAHPASSTKVDKKIVPR
E:  EELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRG
VGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSI
TPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAP
VVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNEL
SDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVA
HVTLQGDPLRGTANLSEAIRVPPTLEVTQQPMRVGNQVNV
TCQVRKFYPQSLQLTWSENGNVCQRETASTLTENKDGTYN
WTSWFLVNISDQDVVLTCQVKHDGQLAVSKRLAL
F:  EELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRG
VGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSI
TPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAP
VVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNEL
SDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVA
HVTLQGDPLRGTANLSEAIRVPPTLEVTQQNVTCQVRKFY
PQSLQLTWSENGNVCQRETASTLTENKDGTYNWTSWFLVL
TCQVKHDGQLAVSKRL
Description


Functional site

1) chain E
residue 240
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

2) chain E
residue 281
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

3) chain E
residue 289
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

4) chain F
residue 240
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

5) chain F
residue 281
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

6) chain A
residue 192-198
type prosite
sequence YTCEATH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCEATH
source prosite : PS00290

7) chain E
residue 215
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19349973
source Swiss-Prot : SWS_FT_FI1

8) chain F
residue 215
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19349973
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links