eF-site ID 4hje-D
PDB Code 4hje
Chain D

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Title Crystal structure of p53 core domain in complex with DNA
Classification Transcription/DNA
Compound Cellular tumor antigen p53
Source Homo sapiens (Human) (4HJE)
Sequence D:  PLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALN
KMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTE
VVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNT
FRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPI
LTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRK
Description


Functional site

1) chain D
residue 176
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 301
source : AC4

2) chain D
residue 179
type
sequence H
description BINDING SITE FOR RESIDUE ZN D 301
source : AC4

3) chain D
residue 238
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 301
source : AC4

4) chain D
residue 242
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 301
source : AC4

5) chain D
residue 176
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:14534297, ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:17015838, ECO:0000269|PubMed:18650397, ECO:0000269|PubMed:19515728, ECO:0000269|PubMed:20142040, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI1

6) chain D
residue 179
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:14534297, ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:17015838, ECO:0000269|PubMed:18650397, ECO:0000269|PubMed:19515728, ECO:0000269|PubMed:20142040, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI1

7) chain D
residue 238
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:14534297, ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:17015838, ECO:0000269|PubMed:18650397, ECO:0000269|PubMed:19515728, ECO:0000269|PubMed:20142040, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI1

8) chain D
residue 242
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:14534297, ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:17015838, ECO:0000269|PubMed:18650397, ECO:0000269|PubMed:19515728, ECO:0000269|PubMed:20142040, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI1

9) chain D
residue 120
type SITE
sequence K
description Interaction with DNA => ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:18996393, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI2

10) chain D
residue 120
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:17189187, ECO:0000269|PubMed:19854137, ECO:0000269|PubMed:23431171
source Swiss-Prot : SWS_FT_FI3

11) chain D
residue 183
type MOD_RES
sequence S
description Phosphoserine; by AURKB => ECO:0000269|PubMed:20959462
source Swiss-Prot : SWS_FT_FI4

12) chain D
residue 269
type MOD_RES
sequence S
description Phosphoserine; by AURKB => ECO:0000269|PubMed:20959462
source Swiss-Prot : SWS_FT_FI4

13) chain D
residue 284
type MOD_RES
sequence T
description Phosphothreonine; by AURKB => ECO:0000269|PubMed:20959462
source Swiss-Prot : SWS_FT_FI5

14) chain D
residue 291
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:19536131
source Swiss-Prot : SWS_FT_FI6


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