eF-site ID 4h2x-B
PDB Code 4h2x
Chain B

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Title Crystal structure of engineered Bradyrhizobium japonicum glycine:[carrier protein] ligase complexed with carrier protein from Agrobacterium tumefaciens and an analogue of glycyl adenylate
Classification LIGASE
Compound Amino acid--[acyl-carrier-protein] ligase 1
Source Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) (AACP_AGRT5)
Sequence B:  ADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITS
HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLH
GTEREINAAVSRFDAGGDWTTSLSPADLVLSPAACYPVYP
IAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMRE
YVCIGTPDDVSDFRERWMVRAQAIARDLGLTFRVDYASDP
FFGRAGKMLANNQRDQQLKFELLIPLRSEEQPTACMSFNY
HREHFGTTWGIQDANGEPAHTGCVAFGMDRLAVAMFHTHG
TDLSAWPAKVRDILGL
Description (1)  Amino acid--[acyl-carrier-protein] ligase 1 (E.C.6.2.1.-), Aminoacyl carrier protein


Functional site

1) chain B
residue 131
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 401
source : AC3

2) chain B
residue 176
type
sequence E
description BINDING SITE FOR RESIDUE ZN B 401
source : AC3

3) chain B
residue 279
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 401
source : AC3

4) chain B
residue 129
type
sequence A
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

5) chain B
residue 131
type
sequence C
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

6) chain B
residue 159
type
sequence R
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

7) chain B
residue 161
type
sequence E
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

8) chain B
residue 169
type
sequence L
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

9) chain B
residue 172
type
sequence F
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

10) chain B
residue 174
type
sequence M
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

11) chain B
residue 176
type
sequence E
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

12) chain B
residue 235
type
sequence K
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

13) chain B
residue 250
type
sequence A
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

14) chain B
residue 251
type
sequence C
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

15) chain B
residue 252
type
sequence M
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

16) chain B
residue 253
type
sequence S
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

17) chain B
residue 255
type
sequence N
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

18) chain B
residue 281
type
sequence A
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

19) chain B
residue 283
type
sequence G
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

20) chain B
residue 286
type
sequence R
description BINDING SITE FOR RESIDUE G5A B 402
source : AC4

21) chain B
residue 283
type
sequence G
description BINDING SITE FOR RESIDUE CL B 403
source : AC5

22) chain B
residue 284
type
sequence M
description BINDING SITE FOR RESIDUE CL B 403
source : AC5

23) chain B
residue 285
type
sequence D
description BINDING SITE FOR RESIDUE CL B 403
source : AC5

24) chain B
residue 286
type
sequence R
description BINDING SITE FOR RESIDUE CL B 403
source : AC5

25) chain B
residue 132
type
sequence Y
description BINDING SITE FOR RESIDUE PNS C 101
source : AC6

26) chain B
residue 215
type
sequence D
description BINDING SITE FOR RESIDUE PNS C 101
source : AC6

27) chain B
residue 228
type
sequence N
description BINDING SITE FOR RESIDUE PNS C 101
source : AC6

28) chain B
residue 232
type
sequence Q
description BINDING SITE FOR RESIDUE PNS C 101
source : AC6

29) chain B
residue 234
type
sequence L
description BINDING SITE FOR RESIDUE PNS C 101
source : AC6

30) chain B
residue 257
type
sequence H
description BINDING SITE FOR RESIDUE PNS C 101
source : AC6

31) chain B
residue 260
type
sequence H
description BINDING SITE FOR RESIDUE PNS C 101
source : AC6

32) chain B
residue 161
type MOD_RES
sequence E
description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258
source Swiss-Prot : SWS_FT_FI1

33) chain B
residue 168
type MOD_RES
sequence R
description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258
source Swiss-Prot : SWS_FT_FI1

34) chain B
residue 176
type MOD_RES
sequence E
description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258
source Swiss-Prot : SWS_FT_FI1

35) chain B
residue 235
type MOD_RES
sequence K
description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258
source Swiss-Prot : SWS_FT_FI1

36) chain B
residue 250
type MOD_RES
sequence A
description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258
source Swiss-Prot : SWS_FT_FI1

37) chain B
residue 279
type MOD_RES
sequence C
description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258
source Swiss-Prot : SWS_FT_FI1

38) chain B
residue 286
type MOD_RES
sequence R
description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258
source Swiss-Prot : SWS_FT_FI1


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