eF-site ID 4h2x-ABCD PDB Code 4h2x Chain A, B, C, D click to enlarge Title Crystal structure of engineered Bradyrhizobium japonicum glycine:[carrier protein] ligase complexed with carrier protein from Agrobacterium tumefaciens and an analogue of glycyl adenylate Classification LIGASE Compound Amino acid--[acyl-carrier-protein] ligase 1 Source Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) (AACP_AGRT5) Sequence A:  DPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITSH REAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHG TEREINAAVSRFDAGGDWTTSLSPADLVLSPAAXYPVYPI AASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREY VCIGTPDDVSDFRERWMVRAQAIARDLGLTFRVDYASDPF FGRAGKMLANNQRDQQLKFELLIPLRSEEQPTACMSFNYH REHFGTTWGIQDANGEPAHTGXVAFGMDRLAVAMFHTHGT DLSAWPAKVRDILGL B:  ADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITS HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLH GTEREINAAVSRFDAGGDWTTSLSPADLVLSPAACYPVYP IAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMRE YVCIGTPDDVSDFRERWMVRAQAIARDLGLTFRVDYASDP FFGRAGKMLANNQRDQQLKFELLIPLRSEEQPTACMSFNY HREHFGTTWGIQDANGEPAHTGCVAFGMDRLAVAMFHTHG TDLSAWPAKVRDILGL C:  HMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASV QLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLI D:  MNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQ LMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKL Description (1)  Amino acid--[acyl-carrier-protein] ligase 1 (E.C.6.2.1.-), Aminoacyl carrier protein Functional site 1) chain A residue 129 type sequence A description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 2) chain A residue 131 type sequence X description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 3) chain A residue 159 type sequence R description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 4) chain A residue 169 type sequence L description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 5) chain A residue 172 type sequence F description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 6) chain A residue 174 type sequence M description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 7) chain A residue 176 type sequence E description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 8) chain A residue 235 type sequence K description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 9) chain A residue 250 type sequence A description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 10) chain A residue 251 type sequence C description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 11) chain A residue 253 type sequence S description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 12) chain A residue 255 type sequence N description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 13) chain A residue 279 type sequence X description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 14) chain A residue 281 type sequence A description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 15) chain A residue 283 type sequence G description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 16) chain A residue 286 type sequence R description BINDING SITE FOR RESIDUE G5A A 401 source : AC1 17) chain A residue 283 type sequence G description BINDING SITE FOR RESIDUE CL A 402 source : AC2 18) chain A residue 284 type sequence M description BINDING SITE FOR RESIDUE CL A 402 source : AC2 19) chain A residue 285 type sequence D description BINDING SITE FOR RESIDUE CL A 402 source : AC2 20) chain A residue 286 type sequence R description BINDING SITE FOR RESIDUE CL A 402 source : AC2 21) chain B residue 131 type sequence C description BINDING SITE FOR RESIDUE ZN B 401 source : AC3 22) chain B residue 176 type sequence E description BINDING SITE FOR RESIDUE ZN B 401 source : AC3 23) chain B residue 279 type sequence C description BINDING SITE FOR RESIDUE ZN B 401 source : AC3 24) chain B residue 129 type sequence A description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 25) chain B residue 131 type sequence C description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 26) chain B residue 159 type sequence R description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 27) chain B residue 161 type sequence E description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 28) chain B residue 169 type sequence L description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 29) chain B residue 172 type sequence F description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 30) chain B residue 174 type sequence M description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 31) chain B residue 176 type sequence E description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 32) chain B residue 235 type sequence K description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 33) chain B residue 250 type sequence A description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 34) chain B residue 251 type sequence C description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 35) chain B residue 252 type sequence M description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 36) chain B residue 253 type sequence S description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 37) chain B residue 255 type sequence N description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 38) chain B residue 281 type sequence A description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 39) chain B residue 283 type sequence G description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 40) chain B residue 286 type sequence R description BINDING SITE FOR RESIDUE G5A B 402 source : AC4 41) chain B residue 283 type sequence G description BINDING SITE FOR RESIDUE CL B 403 source : AC5 42) chain B residue 284 type sequence M description BINDING SITE FOR RESIDUE CL B 403 source : AC5 43) chain B residue 285 type sequence D description BINDING SITE FOR RESIDUE CL B 403 source : AC5 44) chain B residue 286 type sequence R description BINDING SITE FOR RESIDUE CL B 403 source : AC5 45) chain B residue 132 type sequence Y description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 46) chain B residue 215 type sequence D description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 47) chain B residue 228 type sequence N description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 48) chain B residue 232 type sequence Q description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 49) chain B residue 234 type sequence L description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 50) chain B residue 257 type sequence H description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 51) chain B residue 260 type sequence H description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 52) chain C residue 35 type sequence S description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 53) chain A residue 131 type sequence X description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 54) chain A residue 132 type sequence Y description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 55) chain A residue 215 type sequence D description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 56) chain A residue 228 type sequence N description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 57) chain A residue 232 type sequence Q description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 58) chain A residue 257 type sequence H description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 59) chain A residue 260 type sequence H description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 60) chain D residue 35 type sequence S description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 61) chain D residue 36 type sequence F description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 62) chain C residue 35 type MOD_RES sequence S description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 63) chain D residue 35 type MOD_RES sequence S description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 64) chain B residue 161 type MOD_RES sequence E description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 65) chain B residue 168 type MOD_RES sequence R description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 66) chain B residue 176 type MOD_RES sequence E description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 67) chain B residue 235 type MOD_RES sequence K description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 68) chain B residue 250 type MOD_RES sequence A description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 69) chain B residue 279 type MOD_RES sequence C description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 70) chain B residue 286 type MOD_RES sequence R description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1

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