eF-site ID 4h2w-ABCD PDB Code 4h2w Chain A, B, C, D click to enlarge Title Crystal structure of engineered Bradyrhizobium japonicum glycine:[carrier protein] ligase complexed with carrier protein from Agrobacterium tumefaciens and AMP Classification LIGASE Compound Amino acid--[acyl-carrier-protein] ligase 1 Source Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) (AACP_AGRT5) Sequence A:  DPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITSH REAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHG TEREINAAVSRFDAGGDWTTSLSPADLVLSPAACYPVYPI AASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREY VCIGTPDDVSDFRERWMVRAQAIARDLGLTFRVDYASDPF FGRAGKMLANNQRDQQLKFELLIPLRSEEQPTACMSFNYH REHFGTTWGIQDANGEPAHTGCVAFGMDRLAVAMFHTHGT DLSAWPAKVRDILGL B:  ADPLDHLADKLFHSMGSDGVYARTALYESIVERLAALITS HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLH GTEREINAAVSRFDAGGDWTTSLSPADLVLSPAACYPVYP IAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMRE YVCIGTPDDVSDFRERWMVRAQAIARDLGLTFRVDYASDP FFGRAGKMLANNQRDQQLKFELLIPLRSEEQPTACMSFNY HREHFGTTWGIQDANGEPAHTGCVAFGMDRLAVAMFHTHG TDLSAWPAKVRDILGL C:  HMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASV QLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLIL D:  MNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQ LMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKL Description (1)  Amino acid--[acyl-carrier-protein] ligase 1 (E.C.6.2.1.-), Aminoacyl carrier protein Functional site 1) chain A residue 131 type sequence C description BINDING SITE FOR RESIDUE ZN A 401 source : AC1 2) chain A residue 176 type sequence E description BINDING SITE FOR RESIDUE ZN A 401 source : AC1 3) chain A residue 279 type sequence C description BINDING SITE FOR RESIDUE ZN A 401 source : AC1 4) chain A residue 283 type sequence G description BINDING SITE FOR RESIDUE CL A 402 source : AC2 5) chain A residue 284 type sequence M description BINDING SITE FOR RESIDUE CL A 402 source : AC2 6) chain A residue 285 type sequence D description BINDING SITE FOR RESIDUE CL A 402 source : AC2 7) chain A residue 286 type sequence R description BINDING SITE FOR RESIDUE CL A 402 source : AC2 8) chain A residue 159 type sequence R description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 9) chain A residue 169 type sequence L description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 10) chain A residue 174 type sequence M description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 11) chain A residue 235 type sequence K description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 12) chain A residue 250 type sequence A description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 13) chain A residue 251 type sequence C description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 14) chain A residue 253 type sequence S description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 15) chain A residue 283 type sequence G description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 16) chain A residue 286 type sequence R description BINDING SITE FOR RESIDUE 5GP A 403 source : AC3 17) chain B residue 131 type sequence C description BINDING SITE FOR RESIDUE ZN B 401 source : AC4 18) chain B residue 176 type sequence E description BINDING SITE FOR RESIDUE ZN B 401 source : AC4 19) chain B residue 279 type sequence C description BINDING SITE FOR RESIDUE ZN B 401 source : AC4 20) chain B residue 159 type sequence R description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 21) chain B residue 161 type sequence E description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 22) chain B residue 169 type sequence L description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 23) chain B residue 172 type sequence F description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 24) chain B residue 174 type sequence M description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 25) chain B residue 235 type sequence K description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 26) chain B residue 250 type sequence A description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 27) chain B residue 251 type sequence C description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 28) chain B residue 252 type sequence M description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 29) chain B residue 253 type sequence S description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 30) chain B residue 283 type sequence G description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 31) chain B residue 286 type sequence R description BINDING SITE FOR RESIDUE AMP B 402 source : AC5 32) chain B residue 132 type sequence Y description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 33) chain B residue 215 type sequence D description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 34) chain B residue 228 type sequence N description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 35) chain B residue 232 type sequence Q description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 36) chain B residue 257 type sequence H description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 37) chain B residue 260 type sequence H description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 38) chain C residue 35 type sequence S description BINDING SITE FOR RESIDUE PNS C 101 source : AC6 39) chain A residue 132 type sequence Y description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 40) chain A residue 215 type sequence D description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 41) chain A residue 228 type sequence N description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 42) chain A residue 232 type sequence Q description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 43) chain A residue 257 type sequence H description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 44) chain D residue 35 type sequence S description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 45) chain D residue 36 type sequence F description BINDING SITE FOR RESIDUE PNS D 101 source : AC7 46) chain C residue 35 type MOD_RES sequence S description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 47) chain D residue 35 type MOD_RES sequence S description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 48) chain A residue 161 type MOD_RES sequence E description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 49) chain B residue 131 type MOD_RES sequence C description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 50) chain B residue 159 type MOD_RES sequence R description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 51) chain B residue 161 type MOD_RES sequence E description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 52) chain B residue 168 type MOD_RES sequence R description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 53) chain B residue 176 type MOD_RES sequence E description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 54) chain B residue 235 type MOD_RES sequence K description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 55) chain B residue 250 type MOD_RES sequence A description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 56) chain B residue 279 type MOD_RES sequence C description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 57) chain B residue 286 type MOD_RES sequence R description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 58) chain A residue 176 type MOD_RES sequence E description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 59) chain A residue 235 type MOD_RES sequence K description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 60) chain A residue 250 type MOD_RES sequence A description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 61) chain A residue 279 type MOD_RES sequence C description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 62) chain A residue 286 type MOD_RES sequence R description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1 63) chain A residue 168 type MOD_RES sequence R description O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258 source Swiss-Prot : SWS_FT_FI1

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