eF-site ID 4gsu-A
PDB Code 4gsu
Chain A

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Title Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains
Classification TRANSFERASE
Compound Probable conserved lipoprotein LPPS
Source Mycobacterium tuberculosis (O53223_MYCTU)
Sequence A:  LTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIAD
RGAAEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGT
AVDVAVNTYGVDLGEGMFGEDNVQTHFTIGDEVIATADDN
TKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYKH
IIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPW
SVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIVEVVNT
VGGTLPGIDGLGDWNIPWDQWRAGNAKA
Description


Functional site

1) chain A
residue 303
type
sequence M
description BINDING SITE FOR RESIDUE DWZ A 501
source : AC1

2) chain A
residue 308
type
sequence Y
description BINDING SITE FOR RESIDUE DWZ A 501
source : AC1

3) chain A
residue 318
type
sequence Y
description BINDING SITE FOR RESIDUE DWZ A 501
source : AC1

4) chain A
residue 333
type
sequence V
description BINDING SITE FOR RESIDUE DWZ A 501
source : AC1

5) chain A
residue 352
type
sequence H
description BINDING SITE FOR RESIDUE DWZ A 501
source : AC1

6) chain A
residue 353
type
sequence G
description BINDING SITE FOR RESIDUE DWZ A 501
source : AC1

7) chain A
residue 354
type
sequence C
description BINDING SITE FOR RESIDUE DWZ A 501
source : AC1

8) chain A
residue 145
type
sequence T
description BINDING SITE FOR RESIDUE DWZ B 501
source : AC2

9) chain A
residue 354
type SITE
sequence C
description Binds to carbapenem drug (covalent) => ECO:0000250
source Swiss-Prot : SWS_FT_FI5

10) chain A
residue 232
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

11) chain A
residue 235
type BINDING
sequence E
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 236
type BINDING
sequence G
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

13) chain A
residue 318
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI4

14) chain A
residue 331
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI4

15) chain A
residue 356
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI4

16) chain A
residue 336
type ACT_SITE
sequence H
description Proton donor/acceptor => ECO:0000255|PROSITE-ProRule:PRU01373, ECO:0000305|PubMed:23103390
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 354
type ACT_SITE
sequence C
description Nucleophile => ECO:0000255|PROSITE-ProRule:PRU01373, ECO:0000269|PubMed:23103390
source Swiss-Prot : SWS_FT_FI2


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