|
eF-site ID
|
4gbt-A |
PDB Code
|
4gbt |
Chain
|
A |
|
click to enlarge
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Title
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Structural characterization of H-1 Parvovirus: comparison of infectious virions to replication defective particles |
Classification
|
VIRUS |
Compound
|
Capsid protein VP1 |
Source
|
ORGANISM_SCIENTIFIC: H-1 parvovirus; |
|
Sequence
|
A: |
GIGVSTGTYDNQTTYKFLGDGWVEITAHASRLLHLGMPPS
ENYCRVTVHNNQTTGHGTKVKGNMAYDDTHQQIWTPWSLV
DANAWGVWFQPSDWQFIQNSMESLNLDSLSQELFNVVVKT
VTEQQGAIKVYNNDLTACMMVALDSNNILPYTPAAQTSET
LGFYPWKPTAPAPYRYYFFMPRQLSVTSSNSAEGTQITDT
IGEPQALNSQFFTIENTLPITLLRTGDEFTTGTYIFNTDP
LKLTHTWQTNRHLGMPPRITDLPTSDTATASLTANGDRFG
STQTQNVNYVTEALRTRPAQIGFMQPHDNFEANRGGPFKV
PVVPLDITAGEDHDANGAIRFNYGKQHGEDWAKQGAAPER
YTWDAIDSAAGRDTARCFVQSAPISIPPNQNQILQREDAI
AGRTNMHYTNVFNSYGPLSAFPHPDPIYPNGQIWDKELDL
EHKPRLHVTAPFVCKNNPPGQLFVRLGPNLTDQFDPNSTT
VSRIVTYSTFYWKGILKFKAKLRPNLTWNPVYQATTDSVA
NSYMNVKKWLPSATGNMHSDPLICRPVPHMTY
|
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Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
374 |
type |
|
sequence |
H
|
description |
BINDING SITE FOR RESIDUE NA A 601
|
source |
: AC1
|
|
2)
|
chain |
A |
residue |
375 |
type |
|
sequence |
D
|
description |
BINDING SITE FOR RESIDUE NA A 601
|
source |
: AC1
|
|
3)
|
chain |
A |
residue |
148 |
type |
|
sequence |
Q
|
description |
BINDING SITE FOR RESIDUE CL A 602
|
source |
: AC2
|
|
4)
|
chain |
A |
residue |
272 |
type |
|
sequence |
T
|
description |
BINDING SITE FOR RESIDUE CL A 602
|
source |
: AC2
|
|
|
|