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eF-site ID
|
4gbt-A |
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PDB Code
|
4gbt |
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Chain
|
A |
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click to enlarge
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Title
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Structural characterization of H-1 Parvovirus: comparison of infectious virions to replication defective particles |
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Classification
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VIRUS |
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Compound
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Capsid protein VP1 |
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Source
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ORGANISM_SCIENTIFIC: H-1 parvovirus; |
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Sequence
|
A: |
GIGVSTGTYDNQTTYKFLGDGWVEITAHASRLLHLGMPPS
ENYCRVTVHNNQTTGHGTKVKGNMAYDDTHQQIWTPWSLV
DANAWGVWFQPSDWQFIQNSMESLNLDSLSQELFNVVVKT
VTEQQGAIKVYNNDLTACMMVALDSNNILPYTPAAQTSET
LGFYPWKPTAPAPYRYYFFMPRQLSVTSSNSAEGTQITDT
IGEPQALNSQFFTIENTLPITLLRTGDEFTTGTYIFNTDP
LKLTHTWQTNRHLGMPPRITDLPTSDTATASLTANGDRFG
STQTQNVNYVTEALRTRPAQIGFMQPHDNFEANRGGPFKV
PVVPLDITAGEDHDANGAIRFNYGKQHGEDWAKQGAAPER
YTWDAIDSAAGRDTARCFVQSAPISIPPNQNQILQREDAI
AGRTNMHYTNVFNSYGPLSAFPHPDPIYPNGQIWDKELDL
EHKPRLHVTAPFVCKNNPPGQLFVRLGPNLTDQFDPNSTT
VSRIVTYSTFYWKGILKFKAKLRPNLTWNPVYQATTDSVA
NSYMNVKKWLPSATGNMHSDPLICRPVPHMTY
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Description
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Functional site
|
|
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1)
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chain |
A |
| residue |
374 |
| type |
|
| sequence |
H
|
| description |
BINDING SITE FOR RESIDUE NA A 601
|
| source |
: AC1
|
|
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2)
|
chain |
A |
| residue |
375 |
| type |
|
| sequence |
D
|
| description |
BINDING SITE FOR RESIDUE NA A 601
|
| source |
: AC1
|
|
|
3)
|
chain |
A |
| residue |
148 |
| type |
|
| sequence |
Q
|
| description |
BINDING SITE FOR RESIDUE CL A 602
|
| source |
: AC2
|
|
|
4)
|
chain |
A |
| residue |
272 |
| type |
|
| sequence |
T
|
| description |
BINDING SITE FOR RESIDUE CL A 602
|
| source |
: AC2
|
|
|
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