eF-site ID 4g7v-HLS
PDB Code 4g7v
Chain H, L, S

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Title Crystal structure of voltage sensing domain of Ci-VSP with fragment antibody (R217E, 2.5 A)
Classification MEMBRANE PROTEIN
Compound fragment antibody heavy chain
Source Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis) (4G7V)
Sequence H:  EVQLVESGGGLVQPGGSLRLSCAASGFNVSSSSIHWVRQA
PGKGLEWVASISSYYGYTSYADSVKGRFTISADTSKNTAY
LQMNSLRAEDTAVYYCARSYSWSYAIDYWGQGTLVTVSSA
STKGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGA
LTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNV
NHKPSNTKVDKKVEP
L:  DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKP
GKAPKLLIYSASSLYSGVPSRFSGSGSGTDFTLTISSLQP
EDFATYYCQQYFYWPITFGQGTKVEIKRTVAAPSVFIFPP
SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQAGNSQ
ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNR
S:  GVGRVQFRVRAVIDHLGMRVFGVFLIFLDIILMIIDLSLP
GKSESSQSFYDGMALALSCYFMLDLGLRIFAYGPKNFFTN
PWEVADGLIIVVTFVVTIFYTVLDEYVQETGADGLGELVV
LARLLRVVRLARIFYS
Description (1)  fragment antibody heavy chain, fragment antibody light chain, Voltage-sensor containing phosphatase


Functional site

1) chain H
residue 31
type
sequence S
description BINDING SITE FOR RESIDUE LDA H 301
source : AC1

2) chain H
residue 55
type
sequence Y
description BINDING SITE FOR RESIDUE LDA H 301
source : AC1

3) chain L
residue 59
type
sequence P
description BINDING SITE FOR RESIDUE CL L 301
source : AC2

4) chain L
residue 59
type
sequence P
description BINDING SITE FOR RESIDUE CL L 301
source : AC2

5) chain L
residue 61
type
sequence R
description BINDING SITE FOR RESIDUE CL L 301
source : AC2

6) chain L
residue 61
type
sequence R
description BINDING SITE FOR RESIDUE CL L 301
source : AC2

7) chain L
residue 30
type
sequence S
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

8) chain L
residue 65
type
sequence S
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

9) chain L
residue 66
type
sequence G
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

10) chain L
residue 67
type
sequence S
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

11) chain L
residue 68
type
sequence G
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

12) chain L
residue 70
type
sequence D
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

13) chain L
residue 71
type
sequence F
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

14) chain S
residue 204
type
sequence D
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

15) chain S
residue 207
type
sequence V
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

16) chain S
residue 208
type
sequence Q
description BINDING SITE FOR RESIDUE SIN L 302
source : AC3

17) chain L
residue 28
type
sequence S
description BINDING SITE FOR RESIDUE LDA L 303
source : AC4

18) chain L
residue 30
type
sequence S
description BINDING SITE FOR RESIDUE LDA L 303
source : AC4

19) chain S
residue 200
type
sequence Y
description BINDING SITE FOR RESIDUE LDA L 303
source : AC4

20) chain S
residue 204
type
sequence D
description BINDING SITE FOR RESIDUE LDA L 303
source : AC4

21) chain L
residue 53
type
sequence S
description BINDING SITE FOR RESIDUE LDA S 301
source : AC5

22) chain S
residue 208
type
sequence Q
description BINDING SITE FOR RESIDUE LDA S 301
source : AC5

23) chain S
residue 209
type
sequence E
description BINDING SITE FOR RESIDUE LDA S 301
source : AC5

24) chain S
residue 210
type
sequence T
description BINDING SITE FOR RESIDUE LDA S 301
source : AC5

25) chain L
residue 192-198
type prosite
sequence YACEVTH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
source prosite : PS00290

26) chain H
residue 200-206
type prosite
sequence YICNVNH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
source prosite : PS00290


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