eF-site ID 4esv-F PDB Code 4esv Chain F click to enlarge Title A New Twist on the Translocation Mechanism of Helicases from the Structure of DnaB with its Substrates Classification HYDROLASE/DNA Compound 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3' Source (4ESV) Sequence F:  IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAH QKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSY LSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQD GYTREDEIDVLLDEADRKIMEVSAFKNIKDILVQTYDNIE MLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFA LNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINA QNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSD IRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVS EISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDI RESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQR NGPVGTVQLAFIKEYNKFVNL Description Functional site 1) chain F residue 419 type sequence Q description BINDING SITE FOR RESIDUE GDP A 502 source : AC2 2) chain F residue 421 type sequence N description BINDING SITE FOR RESIDUE GDP A 502 source : AC2 3) chain F residue 422 type sequence G description BINDING SITE FOR RESIDUE GDP A 502 source : AC2 4) chain F residue 418 type sequence K description BINDING SITE FOR RESIDUE ALF A 504 source : AC4 5) chain F residue 420 type sequence R description BINDING SITE FOR RESIDUE ALF A 504 source : AC4 6) chain F residue 424 type sequence V description BINDING SITE FOR RESIDUE CA A 506 source : AC6 7) chain F residue 212 type sequence P description BINDING SITE FOR RESIDUE ALF E 503 source : CC1 8) chain F residue 213 type sequence S description BINDING SITE FOR RESIDUE ALF E 503 source : CC1 9) chain F residue 216 type sequence K description BINDING SITE FOR RESIDUE ALF E 503 source : CC1 10) chain F residue 241 type sequence E description BINDING SITE FOR RESIDUE ALF E 503 source : CC1 11) chain F residue 362 type sequence Q description BINDING SITE FOR RESIDUE ALF E 503 source : CC1 12) chain F residue 133 type sequence E description BINDING SITE FOR RESIDUE MES E 504 source : CC2 13) chain F residue 213 type sequence S description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 14) chain F residue 214 type sequence V description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 15) chain F residue 215 type sequence G description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 16) chain F residue 216 type sequence K description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 17) chain F residue 217 type sequence T description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 18) chain F residue 218 type sequence A description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 19) chain F residue 242 type sequence M description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 20) chain F residue 250 type sequence R description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 21) chain F residue 261 type sequence Q description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 22) chain F residue 398 type sequence R description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 23) chain F residue 433 type sequence K description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 24) chain F residue 217 type sequence T description BINDING SITE FOR RESIDUE CA F 502 source : CC4 25) chain F residue 241 type sequence E description BINDING SITE FOR RESIDUE CA F 502 source : CC4 26) chain F residue 242 type sequence M description BINDING SITE FOR RESIDUE CA F 502 source : CC4 27) chain F residue 320 type sequence D description BINDING SITE FOR RESIDUE CA F 502 source : CC4 28) chain F residue 241 type ACT_SITE sequence E description Nucleophile => ECO:0000305|PubMed:12235389, ECO:0000305|PubMed:23022319 source Swiss-Prot : SWS_FT_FI1 29) chain F residue 213 type BINDING sequence S description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 30) chain F residue 215 type BINDING sequence G description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 31) chain F residue 216 type BINDING sequence K description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 32) chain F residue 217 type BINDING sequence T description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 33) chain F residue 218 type BINDING sequence A description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 34) chain F residue 250 type BINDING sequence R description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 35) chain F residue 418 type BINDING sequence K description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 36) chain F residue 419 type BINDING sequence Q description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 37) chain F residue 420 type BINDING sequence R description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 38) chain F residue 362 type BINDING sequence Q description BINDING => ECO:0000305|PubMed:23022319 source Swiss-Prot : SWS_FT_FI3 39) chain F residue 381 type BINDING sequence R description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI4 40) chain F residue 382 type BINDING sequence E description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI4 41) chain F residue 384 type BINDING sequence G description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI4 42) chain F residue 362 type SITE sequence Q description Gamma-phosphate sensor => ECO:0000305|PubMed:12235389 source Swiss-Prot : SWS_FT_FI5

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